Protein

Protein accession
A0A1B1IY38 [UniProt]
Representative
4KpOU
Source
UniProt (cluster: phalp2_17389)
Protein name
Glycoside hydrolase family 19 catalytic domain-containing protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNFFDVVRPMFNGKLTQGQVNGMNRILAYAAEIGCSRAHLAYILATIYHETARWMEPIREGARRYGPNYSDASARRAVAAIYAKGIISRNYALPNAAGLSFYGRGLVQITHEENYAKFNIADNPDAALEWDTALEITFRGMAEGMFTGKSLADVAEVGEQDYTNDRIVINGDVRKNGARIAKYANTFYDALEAYKPKEFDNERSNTDGAWPPRWWPF
Physico‐chemical
properties
protein length:217 AA
molecular weight:24440,2 Da
isoelectric point:6,33
hydropathy:-0,43
Representative Protein Details
Accession
4KpOU
Protein name
4KpOU
Sequence length
135 AA
Molecular weight
15652,47720 Da
Isoelectric point
8,80092
Sequence
MATVEHETAARFQPIIEYGSRKYFERYEGRKNLGNIYTGDGYKYRGRGYVQITGRRNYAKFGLEDEPEKALEPEIAYDILVRGMMNGMFTGRKLSDFVNVDVSNFIHARQVVNGVDRAAKIADFAESWRTAFLWY
Other Proteins in cluster: phalp2_17389
Total (incl. this protein): 4 Avg length: 137,3 Avg pI: 7,37
Protein ID Length (AA) pI
4KpOU 135 8,80092
5FYyP 91 9,06118
7swdN 106 5,31004
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23913
1MvJ3
 1257 45,8% 146 3.992E-42
2 phalp2_14563
4WxUn
 402 41,1% 163 1.610E-39
3 phalp2_28332
1asZp
 50 40,2% 149 1.266E-33
4 phalp2_36087
6BQui
 2 40,1% 142 9.003E-27
5 phalp2_16964
87AJX
 9 45,0% 100 3.601E-24
6 phalp2_1008
6M0OW
 1 37,1% 97 3.349E-20
7 phalp2_28029
6WPz8
 130 41,6% 120 8.614E-20
8 phalp2_21772
3Zpin
 1 36,0% 111 2.006E-18
9 phalp2_8404
IwNf
 80 31,8% 132 9.656E-12
10 phalp2_4623
4nODt
 4 35,1% 108 1.321E-11

Domains

Domains [InterPro]
Unannotated
Representative sequence (used for alignment): 4KpOU (135 AA)
Member sequence: A0A1B1IY38 (217 AA)
1 135 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage MedPE-SWcel-C56
[NCBI] 		1871314 Autographiviridae > Kafavirus > Kafavirus SWcelC56
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
KX397280 [NCBI]
CDS location
range 41980 -> 42633
strand +
CDS
ATGAACTTCTTCGACGTAGTTCGTCCCATGTTCAACGGTAAGTTGACACAGGGCCAAGTCAACGGTATGAACCGTATCTTAGCCTACGCCGCCGAGATCGGGTGCAGTCGCGCCCATCTGGCGTACATCTTGGCTACTATCTATCACGAAACTGCGCGGTGGATGGAGCCTATCCGCGAAGGCGCGCGTCGCTACGGCCCGAACTACTCTGACGCCTCTGCGCGTCGGGCTGTGGCCGCTATCTACGCCAAGGGTATCATCAGCCGGAACTACGCCTTGCCAAACGCAGCGGGTCTCAGCTTCTACGGTCGCGGTCTGGTGCAGATCACCCACGAAGAAAACTACGCTAAGTTCAACATCGCTGACAACCCCGACGCCGCACTAGAGTGGGATACCGCACTAGAGATCACATTCCGTGGTATGGCCGAGGGCATGTTCACTGGCAAGTCCCTCGCTGACGTGGCAGAGGTCGGTGAGCAGGACTACACCAACGACCGGATCGTCATTAATGGTGACGTGCGCAAGAACGGCGCTCGCATCGCCAAGTATGCAAACACCTTCTACGACGCCCTAGAGGCGTACAAGCCAAAGGAGTTCGACAATGAGCGCAGCAACACTGACGGCGCTTGGCCCCCTCGCTGGTGGCCTTTTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4KpOU) rather than this protein.
PDB ID
4KpOU
Method AlphaFoldv2
Resolution 95.99
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50