Protein

Protein accession
ytmy [EnVhog]
Representative
Oker
Source
EnVhog (cluster: phalp2_1299)
Protein name
ytmy
Lysin probability
85%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAASHKKKHTFTALAVSALLIGSTAGAHAQEPTPKHDPAPAAQESTSSFFQEAINPQLPKRTPAVKKTPQQASKELDAKRVQELGLKTKVTESPTVLDENGNPIVPRVENTTKKRVEDHSAEPKPDTTQNAPAAANQQPSSAATAPTSAVSPAPVGNTQKTTNPQPTTTQAPAAAQGVPVNYQATGGTNTKAPTVTSNNKTKAAIVETAKTGIGGTYIWGGKSFKAWDCSGYVSWVLAQHGIKTTAYTFAMKNELKPTSTPEPGDIIFQGGYNHVGIYLGDGMMVSALNPSEGTRIHPVNIMPIDGYYTAT
Physico‐chemical
properties
protein length:311 AA
molecular weight:32694,3 Da
isoelectric point:9,20
hydropathy:-0,53
Representative Protein Details
Accession
Oker
Protein name
Oker
Sequence length
348 AA
Molecular weight
35977,98000 Da
Isoelectric point
8,91180
Sequence
MVASHKKKHTLTALALSALLVGSTSTALAQEPAPKVDPVSAVQDNASSFFQDAAGPQLTENTHDAPAVKKTPQEAARELDAKRIQELGLKTKVTESPTVLDEDGKPIVPRTEAPAQKQPEQPKSDPKPAPAPTTTAAEQAAPAVAQGTTEAPKPQPTQPAVAQSSPATAPASAGNTPKTVKQQPATSTATTPAKAAPRQGTSGVSTKAPAAAQGVPVNYQATGGTNTKAPTVTSNNKTKAAIVETAKTGLGGTYIWGGKSFKAWDCSGYVSWVLAQHGIKTTAYTFAMKDELRPTSTPEPGDIIFQGGYNHVGIYLGDGMMVSALNPSEGTRIHPVNIMPVDGYYTAL
Other Proteins in cluster: phalp2_1299
Total (incl. this protein): 2 Avg length: 329,5 Avg pI: 9,06
Protein ID Length (AA) pI
Oker 348 8,91180
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28205
gs6s
 3 29,9% 234 9.389E-08

Domains

Domains
Disordered region
Unannotated
Representative sequence (used for alignment): Oker (348 AA)
Member sequence: ytmy (311 AA)
1 348 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
ytmy
Method AlphaFoldv2
Resolution 60.28
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (Oker) rather than this protein.
PDB ID
Oker
Method AlphaFoldv2
Resolution 58.58
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50