Protein

Protein accession
yrD3 [EnVhog]
Representative
5tTh7
Source
EnVhog (cluster: phalp2_32026)
Protein name
yrD3
Lysin probability
99%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
ITALVLLYKHNKKFKKFVDGMFSAAKKAFDKIFKVTKEIFGKIIDFFKKDWKQVLLFIANPIAGAFALIYKHNKKFKKFVDGIVKSIKDGFSNAGKWLGKTWDGMKKTWTGAMDSMTKSTKKGFEKTKTYFTGGEKGIKAFTNTAKKLLVISNPVVAGFELMYKHNKPFKKFVDSTVDHVKDMAKGVAKHMTSLKKDWSDKWDNVKKFASKTWENIKGNATEAMTALGKDIDKHHKGINKNWFDGWENSKKFLSKKWDEIGALTQEKFGVNITKLITDALTNIGNFFKNTWDNVKKGFGEMWDGMKKLAGDGINAVIALPNAGIDGINKLISDFGGSKEAISKIPKVKFAGGTGMFSSYRNPITKPTLATLNDCYDSPETNNQEMVILPNGKSFLPQGRNVEYLLPAGSEVINASELAMLMGVERGAFAKGTGFWSKIWDTATNVAGSVWDTMKNGVDKFMKMIEFVGDVVKDPVGSLAKKFSPNADKLAGMFNPLGNALYKKPVEEAKNWWKELWSMANASMDEGTVAMGAKGDDYRFKDKAKDAGADPWGYFYRECVSFVASRLANLGVKPSLFSHLGNGNQWISASVPHLSRPKPGTVAVYTGGPVSSNHVDFVTAVHGDTYDGEEYNYGGNGQYHQYAGRHISNAATFLDFGVRDSGGGGEDNSKPLKDRNNPLQTLIKRQVGGMFEWIKKTLGPLLSPAGGGEDNPQGTGVSRWRESVEKALKANGLPTTQEYVGAWLRQIQSESGGNPNAVQGGYVDINTLTGDLAKGLVQTTSSTFNSFKHKGHGNIFNGYDNLLAGIAYAKSRYGGNMLAVIGHGHGYANGGLVHKNGVYELAEGDMPEYVIPTDIAKRGRAWQLLTEAVARFAGDAPQGNHDNTSDRERVSVLEDKLDVMIGLLSQLVTNGSNPIEVRNIIDGRSVSNGLAPFMTKATNDYERRQALLGGSII
Physico‐chemical
properties
protein length:952 AA
molecular weight:104412,8 Da
isoelectric point:9,43
hydropathy:-0,42
Representative Protein Details
Accession
5tTh7
Protein name
5tTh7
Sequence length
1114 AA
Molecular weight
120699,47100 Da
Isoelectric point
10,06160
Sequence
LLVKKFNVGNSLDKMLANLAKGIDKVGANIVAHKKEIKSFFSSMKTASKTSFNVFVQSLKDIEPILKIVGGFAEKHPKVFAGLASSAYVASKGIDALKLAFSGLDFAKGIGGKLSRIVFKPKVDGAEGKRELTKFASFVKRSGAGMGRWLKMAASVTTTKAKGVLSSMWTHTKSVGGKIGKGLKWTAKIAYKGASKAFSVLGAGIKTLGKSFLSLGKLLLTNPIGLVLTAVIALGVAFYEAYKHIKPFREWVNKTFKSVVNFGKGIAKWGSNVGKSVKKALGNMSKKWNGFKKSFKKSWNKHWSDAGKSLKGAWDGSVKHTREFFSSIGKKWNGWKSSFKKSWSKHWSTTGKSLKNSWNGSLKHTREFFSSVGKKWNGWKSSFKKSWSKHWNSTKSGLHNAWNGSYKHTKNFFGSMGSKWVGWKKSWSHSWNSHWNKMRSNLHSYWNKDLSHTRVFGKSMGGWLSTFKGKFKGGWSSLGTGVENIFKGLWKNLKKFARDGMNDVIDLINSGINAVDSVIHTFGGKKKTIADLHHVHFSEGTGMFSGSRNPITKPTLAMLNDGNDSPQTGNKEMVMLPNGDSGIVQGRNTKMMLPAGTEVLSASETAMLMSMQGVTKYAKGTGFFGDILNSVTSGISGVTSWVGKKVGSLEKFFKTAENIIAHPIKSLENLFSWSSKGISGVMSNIGHGLFKGVEKQAKTWWSTLWGGVSDSLDDGTGSSSSLVKAMEKYGATNKYVWGAAGPSAFDCSGLVEYTLKKMGISFPRTSGEQYKASKHVSNPKPGDLAFFGPGGSEHVGVYIGGGKMYSAENEHDGMGISKVHGGGFGSFAGYGRVPGLSDSDSSDKSAKSSGLLGTIKKQVGSGFWKFISKLADMFGDNGGSIEGGAITHSMINRALEMTKVPRRYWSKMQSAIIKTADSETGNRNIMQTISDVNSANGNPAGGPLQFTKTTFDAFAFPGHHNFRSSFDQVLAFLNNSDYLNATGNTSIWGHAKYDWLHSGPQGHKRFENGGIINTNQLIEVAEHNKPEMVLPLTNKSRANQLIAQASQVVNGNNGSQIASTNSESNEKLDKVIALLTALVSGQGNVQAVIAKSDVVNAVKSNNKTASQYSQMMGY
Other Proteins in cluster: phalp2_32026
Total (incl. this protein): 33 Avg length: 1032,1 Avg pI: 9,52
Protein ID Length (AA) pI
5tTh7 1114 10,06160
11tnZ 979 9,43432
1Z0sZ 855 8,12858
1bM6I 1101 9,74648
2jDlv 566 9,12577
3c7Dc 998 9,46784
3xEYD 948 9,41666
3xRov 1901 10,02092
3yVby 1015 9,52960
5tYBO 673 9,12120
6EHhl 887 9,46913
6YwNm 1012 9,57454
6ZKQC 879 9,30925
7BGH6 872 9,33536
7FrO0 1359 9,70483
7Fs2T 1455 9,73616
7Qlvw 890 9,25329
7mF12 784 9,94143
7mFLS 675 9,35425
7o1nS 1075 9,88399
7pYTS 1359 9,82661
7qQqH 1138 10,01009
7sNFM 1236 9,70412
7vyGs 786 9,65209
7z7XD 566 9,67388
8mHn9 1133 9,83061
8ofjE 767 9,36302
8pCk5 760 9,04383
ERbz 1162 9,30912
OqSB 1010 9,51284
pFBe 1568 9,35419
A0A2P0ZLG0 1583 9,77993
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_39680
eQI
 275 23,0% 1224 2.475E-128
2 phalp2_3948
7g15J
 9 23,8% 1186 1.509E-127
3 phalp2_20979
7wDdb
 23 23,0% 1073 1.234E-117
4 phalp2_27797
7wN5Z
 2 24,7% 1146 4.385E-109
5 phalp2_12320
7vQnK
 16 24,1% 1178 4.935E-103
6 phalp2_13297
3xFth
 5 24,3% 870 9.184E-89
7 phalp2_37988
5tToF
 60 24,1% 1086 3.112E-85
8 phalp2_18933
28wdb
 2 21,9% 826 7.625E-80
9 phalp2_3742
5tUpG
 27 23,5% 1033 1.338E-77
10 phalp2_15249
11Bcx
 7 23,5% 1074 3.716E-71

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5tTh7) rather than this protein.
PDB ID
5tTh7
Method AlphaFoldv2
Resolution 53.22
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50