Protein

Protein accession
yp10 [EnVhog]
Representative
5t09q
Source
EnVhog (cluster: phalp2_18351)
Protein name
yp10
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MGEFTPAHYYEQREVPCRVVVLHTMEAPEGTNTAENVARYFAGGSVVASAHACVDEDSVVVCLPPSAVAFAAPGCNADGYQVEHAGYARQSPEEWGDTASISMLKLSAAHTKQIAQQLGIPLRHLSDDELANGASGFVGHDQVSRVYKKSDHTDPGASFPWAYYMALVNGSETTTEPEHKGEENMQFIRSRQTGTIYAVTPLAVTSMKSAKTWTDMVKAYALDDSYTVSLDDGDIASIAADAAARRKLLADDIAAAIKAGA
Physico‐chemical
properties
protein length:261 AA
molecular weight:27889,7 Da
isoelectric point:4,96
hydropathy:-0,23
Representative Protein Details
Accession
5t09q
Protein name
5t09q
Sequence length
239 AA
Molecular weight
27101,43400 Da
Isoelectric point
6,71470
Sequence
MFVQAKHFTNASRGVGDIRRIVVHTAEIQEHRDSAEDVAEFFRTTTKEVSAHKCVDNNTIVDCVRLEDIAFHAKGDNEGTVGYELSGFAKQTRAQWRDAYSLDVIELFCQDAAKLCKIHDIPMRWLTADQERRRVKGFVTHKIVSQVFGAGIRSDPGPNFPFDLVEKRVKELLAPSSANLVYVILDESGQVSLATSATAKNTMPSRLHRLETFFTNQLVLIDKELQEDNDIVIRRRRVT
Other Proteins in cluster: phalp2_18351
Total (incl. this protein): 43 Avg length: 257,3 Avg pI: 5,28
Protein ID Length (AA) pI
5t09q 239 6,71470
1fVdm 196 5,61554
1nIIc 277 6,30631
1nxKn 268 5,81232
1pjFR 245 4,98247
2aKSd 262 4,61938
3QwWR 244 5,54268
3cf44 262 4,68049
3npVA 231 6,82934
454Fj 257 6,70452
4CpSn 179 7,26598
4Dlg5 274 6,44869
4c3ju 274 6,70458
5B5nd 239 6,71470
5M06I 264 4,59818
5MISE 261 4,84037
5SDUm 318 4,65514
5Uahs 315 4,56419
5V1bj 236 4,58869
5WCBv 315 4,83657
5kjhW 269 4,82582
5klTr 248 6,10874
60bUS 211 4,45933
6YYl0 243 4,49326
6ZJ36 211 4,75466
6ZJMl 279 4,59756
6hBsW 237 4,83947
6nw5S 261 4,88505
6rWP3 211 4,39749
6sJqG 238 4,69185
7N8EA 262 4,63189
7YPeI 284 5,44759
89EeL 255 4,60171
8dGtu 284 5,22887
8dPvY 283 5,43303
8ozoJ 262 4,64525
8pLir 315 4,55493
OIzW 277 4,48985
YklX 176 7,86348
oMOk 262 4,89147
oNen 315 4,58528
p4Fx 262 4,61256
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11245
6EoH4
 30 40,1% 182 8.836E-72
2 phalp2_24741
6EXtT
 52 42,6% 176 4.763E-69
3 phalp2_22201
6VaYI
 26 41,0% 173 6.523E-69
4 phalp2_1243
oSGY
 19 31,0% 190 5.990E-59
5 phalp2_33007
4igcZ
 220 42,6% 169 1.894E-57
6 phalp2_31178
7Vvn5
 47 41,1% 175 4.317E-50
7 phalp2_16822
1p2ki
 32 32,3% 173 8.729E-45
8 phalp2_7739
6UXdw
 5 37,3% 158 1.194E-44
9 phalp2_35315
7b5mp
 11 33,1% 163 5.555E-41
10 phalp2_10922
4ERj9
 80 31,2% 163 1.304E-34

Domains

Domains
Ami2
Representative sequence (used for alignment): 5t09q (239 AA)
Member sequence: yp10 (261 AA)
1 239 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5t09q) rather than this protein.
PDB ID
5t09q
Method AlphaFoldv2
Resolution 82.39
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50