Protein

Protein accession
16YDd [EnVhog]
Representative
16YDd (this protein)
Source
EnVhog (cluster: phalp2_11570)
Protein name
16YDd
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VYEILNPKKYITVVKIPLSNIEKVDMIMAKQPTETMSSCYNRLTEKPTFLINGSLYNMKDGATITTVVDEGKLIALGYGAMFGLSIYKDGTLKFEAYNSSANLKDYIGACPSLVVNGKISIDTRGLDNGFVNSRHPRTAIGMNNEYFYIIIADGRNPNQGYIGMTLNELATFALNELKCTNAMNLDGGGSTRLMYKDKVINHVTENRAVDNFLAFYIKKPKPLKVMKVNVASALNIRSAPSTSGNILGTYSNGMVVNVYEEKNGWAFTDDGWVSLSYLVPYTTVKKNGVTIVIDCGHDSVADNKNLGYSKKYKEHEGNWEYGHKLKKYLEEHGFTVIMTRPTNSTTLSLSERARVAIDNKALVFMSIHSDALPTNTSAGGTSVYYSINRPNDKSLAERIGKCIAKSYGINFRGALTRPSTTRAGFDYYTIIDVAANYKKLMDDNNLYEVPHVFLVERAFHSNPNEEKLLLDETISDKSAKELANEINLIFGNGEPKLEDDDIMLIDSLICKKIINVNTALNVRELPNTNSKILGQLKNGDIVQVTGKANNWYRINYNGKDAFISGDYVKDYVEKDYSKEIQELKNEVSILKAKIKSAISALS
Physico‐chemical
properties
protein length:602 AA
molecular weight:67016,6 Da
isoelectric point:8,50
hydropathy:-0,31
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10364
1GIkp
 11 30,9% 423 2.374E-29
2 phalp2_35751
4e0HH
 1 25,5% 520 1.265E-13
3 phalp2_29360
13xhB
 3 27,0% 403 1.890E-11
4 phalp2_12438
niO9
 5 23,7% 506 4.143E-07
5 phalp2_24679
5Px9F
 8 23,5% 551 2.010E-05

Domains

Domains
NAGPA
SH3_3
Ami3
SH3_3
Disordered region
Protein sequence: 16YDd
1 602
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520, PF08239, PF09992

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
16YDd
Method AlphaFoldv2
Resolution 88.87
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50