Protein

Protein accession
sDUr [EnVhog]
Representative
5yR42
Source
EnVhog (cluster: phalp2_35998)
Protein name
sDUr
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VISSNRAPKKGLDLLLGEKVAKVALGEVGVTEIPMGSNTGPKVRSYQMATDLGGTGWPWCGAFVAWCYKMAHCPDDNLTSPSTAVTYQRAKSQGAILAKPRVGAMILWPGVHIGLIVEDLGGSLVRTVEGNSSDSVRIRTRRVGDNGSIVVAPQVIRKSRPAPAPRMYYIERLDAKPRLVGPWRTKAARDRAYNRLKPNVKRMARKVRIGRNKYAMSIGSRRIIGPWVSKKSRDNIVRRLRAKGERVRPFSRARKRSAAVADELGKVN
Physico‐chemical
properties
protein length:268 AA
molecular weight:29533,1 Da
isoelectric point:11,21
hydropathy:-0,40
Representative Protein Details
Accession
5yR42
Protein name
5yR42
Sequence length
198 AA
Molecular weight
21617,71070 Da
Isoelectric point
10,36421
Sequence
MTKGDAVVKVALAEVGVTEVPIGSNTGPRVRQYQAATDLGGTGWPWCSAFVEWCWKRVGGIDTAICSPSTAVFAARAISERLTGACRPGAAVCWAPRHVEIAVAPTSDPNVWHCVGGNVSDGVRRTIRDIRGATIIVPKALRETQPRPKLYWFEDPGAKKNQRLLGPWRGKRGLTTARRVAKKRPAWEQPRVKRVGKD
Other Proteins in cluster: phalp2_35998
Total (incl. this protein): 7 Avg length: 244,1 Avg pI: 10,60
Protein ID Length (AA) pI
5yR42 198 10,36421
24tgm 249 11,33736
4AfGG 255 11,17574
4b9Z1 267 10,64897
5B1MA 263 9,74789
6Wgk8 209 9,68884
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_32297
8jnU
 49 42,0% 200 1.890E-55
2 phalp2_24483
4HKsq
 2 30,1% 176 1.602E-35
3 phalp2_13117
8kcye
 6 27,5% 214 5.963E-22
4 phalp2_31351
2tjAl
 675 35,5% 152 1.169E-19
5 phalp2_26488
279oL
 77 28,7% 191 7.508E-19
6 phalp2_13408
4tHhZ
 205 30,2% 139 5.702E-17
7 phalp2_4295
86oVQ
 2 28,4% 211 7.764E-17
8 phalp2_14701
6x2lo
 4 26,9% 197 1.439E-16
9 phalp2_2852
gmZ9
 1 33,7% 154 3.632E-16
10 phalp2_33133
4NTMg
 12 34,6% 150 1.246E-15

Domains

Domains
Unannotated
Disordered region
Representative sequence (used for alignment): 5yR42 (198 AA)
Member sequence: sDUr (268 AA)
1 198 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5yR42) rather than this protein.
PDB ID
5yR42
Method AlphaFoldv2
Resolution 86.22
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50