Protein

Protein accession
rmA8 [EnVhog]
Representative
3lPvd
Source
EnVhog (cluster: phalp2_10743)
Protein name
rmA8
Lysin probability
86%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MIRSYHQMELSILLCIWTNVLKMTRQQKEAGSEKSTRRLRSGIIIQDRGEEYSYRLLENGFISNHEDLNKFNSQIDDLARGILKAFGISSAAPVASAKKTEPVDGEIKSGGAFQNKTDKFGTILYQAHMRGIGWGNWQSDGLMVGSTGQNRRIEALHIKPDGETDVAVHMKEIGNKEYKNIKKDTLIGTTGQNRRLEAIRITGKESFYLYRVHQKSIGWSEWANNGEWAGTTGKGLQMEALEIKKSMFSVEPHVQSKGWLSPRAAENVIGITGHALRLEAIRINPYGKTIKAKAHIQSKGWVDYGMITKDTIIGTVGEKKRIECLCFEGDFEYRVHIQSSGWTDWTKADGVATLGTVGQELRIEAIQFR
Physico‐chemical
properties
protein length:369 AA
molecular weight:41449,7 Da
isoelectric point:9,25
hydropathy:-0,50
Representative Protein Details
Accession
3lPvd
Protein name
3lPvd
Sequence length
289 AA
Molecular weight
31836,82600 Da
Isoelectric point
9,32930
Sequence
GILKAFGITSAAPVASAKKTEPVDGEIKSGGVFQNKTDKFGTISYQAHMRSAGWGAWQSDGLMVGSTNQNRRIEALHIQPVGETDVVVHMKGIGNKEYKNITKDTLIGTTGQNRRLEAIKITGKESFYLYRVHQKSIGWSEWANNGEWAGTTGKGLQMEALEIKKSMFSVEPHVQSKGWLSPKAAENVIGITGHALRLEAIRINPYGKTIKAKAHIQSKGWVDYGTITKDTIIGTVGEKKRIECLCFDGDFEYRVHIQSSGWTDWTRADGVATLGTVGQELRIEAIQFR
Other Proteins in cluster: phalp2_10743
Total (incl. this protein): 3 Avg length: 322,0 Avg pI: 8,81
Protein ID Length (AA) pI
3lPvd 289 9,32930
13CxC 308 7,85465
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_14684
6koqf
 113 74,8% 290 6.282E-181
2 phalp2_36727
6s2bd
 8 63,6% 272 1.701E-119
3 phalp2_10500
7W2CA
 1 71,2% 202 3.193E-119

Domains

Domains
Disordered region
ChW
Representative sequence (used for alignment): 3lPvd (289 AA)
Member sequence: rmA8 (369 AA)
1 289 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07538

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
rmA8
Method AlphaFoldv2
Resolution 83.60
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3lPvd) rather than this protein.
PDB ID
3lPvd
Method AlphaFoldv2
Resolution 93.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50