Protein

Protein accession
rkKQ [EnVhog]
Representative
5W6VD
Source
EnVhog (cluster: phalp2_35173)
Protein name
rkKQ
Lysin probability
99%
PhaLP type
endolysin
Probability: 96% (predicted by ML model)
Protein sequence
MFMAFDDTHKACIIAVLATVEAGNDYGIISAPDTLSLGIGQWTQGRAYDLLKRFPAGTDFGGTVNGWLAEGRDSWTIGSRQYAYLGSGDRAALSGALDSETGHKIQNSQMLDDLNNDYIPRCQELGLDTENETEAAMLLIVVMHRWGNYAKILKRLVNACPHPASLDDMAAAIKYEGEWYAVGQRYEVAYDMISRLETNGITLNPGDSQDHSGNAAADKAADAKKIKSVEDMGDGTLRVKCNDGSFARCYSVGTGYWKASAKGQDKVSESAQNNGAAPGGPVGEGIKAMTKLAWDSIGKFEYHQWYNARLHPDQTGVTDCSGFCWWLYMTCCNIDIGPGGTAEIYGSSTGWVVASGGGPFNAADQVREGDLVVCRWYSGGGHIEYCTGGDGGWESIGARGPDGHPEPNVGSLSMFGSCSWELRRYV
Physico‐chemical
properties
protein length:426 AA
molecular weight:45898,5 Da
isoelectric point:4,89
hydropathy:-0,36
Representative Protein Details
Accession
5W6VD
Protein name
5W6VD
Sequence length
438 AA
Molecular weight
47607,41410 Da
Isoelectric point
5,05392
Sequence
MGFDSTARACLIATIARVEASGDYGCITAPDTLSLGIGQWTQGRAYDLLKRFSAGTDFGGTVNAWLTEGRDSWTISARKYQYLDSDDRAKLSGALDSAEGHQIQDSQMSMDIDDSYIPRVRELGLDPESETDAFMLFVIVMHRWGNYGSILPDIVADAGHPATLDSMAQAIKWNGEWDAVGQRYEIAYQMIRDRVTDGVQVPSSPGNTGNKDNGGGIKGNKTLASLAKQSRLINYVRENGDGTLHIQTSQGPVTAHPTSTGYWTCSPSGQRAQANKNMGGLGKKPGTEPPTGDTATKLAAMTKCAWDSIGKYVYYQHYLERLDPENSGETDCSGFCWYLYNKFFGIDIDRNGTAAIIESPTGTVVAEGDGSFDRPDLVREGDLLVCRWWSGGGHIEYCTGGDGGWQSIGQRGPDGVLGPDVGSLSMFKNCTWKLKRYV
Other Proteins in cluster: phalp2_35173
Total (incl. this protein): 92 Avg length: 421,2 Avg pI: 6,48
Protein ID Length (AA) pI
5W6VD 438 5,05392
11sSX 448 5,43946
11u0m 424 8,93063
11u3i 436 5,04653
1cskD 423 4,93791
1gEDS 443 5,65641
1kJua 424 8,93069
1kq7M 423 4,97838
1kq7R 445 8,60867
2biU9 427 4,74170
2biVC 277 5,11542
2bjBw 425 5,17686
3c55C 424 5,13150
3c5R9 426 4,98139
3c9eD 448 5,99557
3cfck 307 4,99543
5LRdW 439 4,91665
5LiDj 423 8,94997
5ME4Q 435 4,93035
5N5YJ 424 9,04770
5NyZP 435 4,87363
5Qbqh 424 9,01289
5RXRm 424 9,01289
5SFoX 301 5,21977
5ShfB 423 9,06788
5SlU8 450 5,12434
5V16f 424 9,02643
5WZWc 424 4,88965
5WgQi 448 5,76611
5XrKS 424 4,83139
5Xs0r 424 8,93695
5Y4GP 428 4,78001
5YpTY 423 8,94333
5Yvce 448 5,99625
5Z0Vn 434 4,93035
5ZIMd 424 8,99980
60AsS 448 5,99898
60nrX 424 8,93063
61BJt 423 8,94333
61i9r 423 9,01295
63mzs 424 9,00631
64iQ4 424 4,98935
65tNo 423 8,84572
65x48 424 8,92450
672Kj 426 4,85572
67uxD 424 8,84572
68PoJ 424 4,93626
68hhL 423 9,01966
68tiH 448 5,76304
6c98e 424 4,88965
6cgZM 424 4,84572
6cgZO 438 5,04784
6dQqF 423 8,99980
6hLbA 435 4,87363
6i4A3 425 5,00845
6iNPS 427 4,78001
6iW3w 437 4,87993
6kYy9 445 8,58882
6my6y 426 4,88965
6nDCi 435 4,97162
6pwAs 424 4,88965
6qHhy 424 8,94333
6qtS2 435 4,83071
6uisp 438 5,05392
70xCW 424 8,75959
7NiBu 283 5,12576
7NpJJ 424 4,98872
7O3kW 427 5,12525
7OcyQ 423 8,84572
7Om8W 424 4,93120
7OuOz 425 9,03352
7OybT 424 8,63884
7UNEq 424 9,01289
7UOmK 439 4,71635
7ZBlV 424 8,99980
8bDuV 424 9,00638
8bEs8 276 4,66724
8bpHd 385 9,30815
8hiOv 424 5,12525
8hjv7 426 4,88965
8hjvs 450 5,19045
8hkyP 427 4,78001
8qUs5 423 8,99980
8qVFv 424 4,93791
JQYR 424 4,88965
Kyln 444 8,24991
NtOU 424 4,93791
NtoK 424 8,83992
oC0W 424 4,94456
peh3 424 4,93791
zh77 424 4,98412
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13422
4z3Nv
 671 24,8% 442 1.514E-35
2 phalp2_8162
6VfMu
 4 25,5% 438 1.250E-30
3 phalp2_9264
70WV0
 16 28,0% 282 2.261E-30
4 phalp2_11848
8fAiU
 1 23,3% 412 7.058E-10
5 phalp2_6579
1d7v3
 1 20,0% 430 1.543E-08
6 phalp2_23511
6YME8
 20 17,9% 318 6.258E-08
7 phalp2_32444
11uoj
 18 21,4% 331 1.917E-07

Domains

Domains
Unannotated
Unannotated
Unannotated
Representative sequence (used for alignment): 5W6VD (438 AA)
Member sequence: rkKQ (426 AA)
1 438 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5W6VD) rather than this protein.
PDB ID
5W6VD
Method AlphaFoldv2
Resolution 80.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50