Protein

Protein accession
pdZl [EnVhog]
Representative
1W8Yf
Source
EnVhog (cluster: phalp2_29507)
Protein name
pdZl
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSEIKNLTDYELRNLLLQAGWEEKSDAYETIGDIVRLIKAESSGNPRATNFKYPDYSFGLMQVNMLDEPGYLLGEERRKRYNLPNNEALFDPLTNLKVAKGIYDRKGGLKDWGAWTSGAYKDYDYNPEPPLEEKAAEAVNLSENWLTKVSPLLEGLKNINPFKKEEKKPTVIPPLPPIPDNMGNQWDNY
Physico‐chemical
properties
protein length:189 AA
molecular weight:21630,1 Da
isoelectric point:4,92
hydropathy:-0,80
Representative Protein Details
Accession
1W8Yf
Protein name
1W8Yf
Sequence length
189 AA
Molecular weight
21631,10550 Da
Isoelectric point
4,83389
Sequence
MSEIKNLTDYELRNLLLQAGWEEKSDAYETIGDIVRLIKAESSGNPRATNFKYPDYSFGLMQVNMLDEPGYLLGEERRKRYNLPDNEALFDPLTNLKVAKGIYDRKGGLKDWGAWTSGAYKDYDYNPEPPLEEKAAEAVNLSENWLNNINPLLEGLKNMNPFKKEEKKPTVIPPLPPIPDNMGNQWGNY
Other Proteins in cluster: phalp2_29507
Total (incl. this protein): 2 Avg length: 189,0 Avg pI: 4,88
Protein ID Length (AA) pI
1W8Yf 189 4,83389
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_5240
852fn
 20 48,7% 119 2.689E-23
2 phalp2_37898
7IU6z
 15 34,3% 137 1.143E-10

Domains

Domains
Unannotated
Disordered region
Representative sequence (used for alignment): 1W8Yf (189 AA)
Member sequence: pdZl (189 AA)
1 189 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
pdZl
Method AlphaFoldv2
Resolution 86.58
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1W8Yf) rather than this protein.
PDB ID
1W8Yf
Method AlphaFoldv2
Resolution 86.56
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50