Protein

Protein accession
oDa2 [EnVhog]
Representative
3dGzs
Source
EnVhog (cluster: phalp2_30116)
Protein name
oDa2
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MFLTDLADKLRAYQAPDGKRPNVIEIGGWKTRGYQAGAGWQLDAVNGVLWHHTATASARYQTTGAPTLNMCINGRSDLPGPLAHIVFGRNAEVYVIAAGWANHAGIGDFPGVPTNRGNEFLIGIEMESSGAAPADWTAAQLEYMPVLGAALERGYGNGXXXHRERLTRRLSTWILSETTSISYLLAVPQPLADKETGSTWLPKPSWNKLFIILAVLSGATAL
Physico‐chemical
properties
protein length:222 AA
molecular weight: Da
isoelectric point:6,97
hydropathy:
Representative Protein Details
Accession
3dGzs
Protein name
3dGzs
Sequence length
323 AA
Molecular weight
34485,95680 Da
Isoelectric point
5,99398
Sequence
MAFNLDNMAVVLRAAGLKVVETPGWKTRGYAQQDLKACLGVLWHHTATNRLQFAGNNIPTLNMLINGRSDLPGPLCNLGFGRDGTVYIVATGVANHAGAGYLPGIPRDMGNHYLIGIEMESSGIKPWDWTPEQLYWAPRLGAALEKGFLMGLPPEKRIQAAHYEYSSQGKIDPAGWPGNMDGLRASINAILAGPAPKPPAPKPPVKDAFEMATPEDFFNKSFARQGPGATGTTSLGGMVAWMDSNLRNIMNQNAAQDAVIKSLVGAVAALSKGQTFDEAKLLDSIQARVEAGIQNVDELAAAGVQEAIDSIDTTVNVNLKPKE
Other Proteins in cluster: phalp2_30116
Total (incl. this protein): 45 Avg length: 302,9 Avg pI: 5,85
Protein ID Length (AA) pI
3dGzs 323 5,99398
11syb 307 5,74133
11wwu 307 5,62981
1cljA 307 5,91406
1jn3G 253 5,39541
1jqAr 305 5,97158
1jqh5 277 9,31976
1jqsw 280 9,01779
1ofRX 299 5,47157
3MW7L 329 4,14268
3V3x0 304 4,82253
3eajR 330 6,30853
401Uw 317 5,17197
4KDPa 218 5,67159
4Lxvx 268 6,45199
4YhCN 319 5,12957
5Cjpm 299 5,26627
5Ck5z 298 5,08302
6GDcf 283 4,99873
6XIYC 289 6,88646
6YZkt 309 5,82818
6Zbam 309 5,82818
6Zmy6 307 6,00847
6lX9Z 240 6,21628
6wbTW 309 6,17620
71h46 309 5,99426
72byE 316 5,87365
78Lb 263 4,60716
7ONIn 309 5,99620
7ZASm 309 5,76759
7bQX8 309 5,69148
7yd9U 394 4,27267
7yd9s 395 4,28938
8Lr58 348 7,71586
8iLi2 307 5,80408
8qV21 307 5,63584
BPqT 309 5,99421
D9Hc 309 5,83199
K5Me 307 6,00734
O1P1 309 5,99426
hl8i 299 4,99833
pnCo 309 5,67716
qbxi 307 6,01080
x1ok 307 5,62981
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_509
8Lr6h
 28 55,5% 254 6.324E-105
2 phalp2_30398
4MRRT
 4 56,4% 209 1.789E-84
3 phalp2_2737
7uk55
 6 46,5% 200 1.003E-62
4 phalp2_36860
7gDKs
 246 46,9% 198 4.056E-58
5 phalp2_22551
1qQEX
 38 40,0% 227 1.253E-51
6 phalp2_12497
QM59
 22 38,1% 220 1.274E-44
7 phalp2_32562
1EaZA
 16 42,9% 207 3.226E-44
8 phalp2_28020
6Vxjq
 39 33,6% 232 6.194E-42
9 phalp2_12024
7Qd9Y
 81 34,9% 229 7.489E-39
10 phalp2_7405
4FizF
 295 33,7% 228 1.032E-36

Domains

Domains
Ami2
Disordered region
Representative sequence (used for alignment): 3dGzs (323 AA)
Member sequence: oDa2 (222 AA)
1 323 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
oDa2
Method AlphaFoldv2
Resolution 73.29
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3dGzs) rather than this protein.
PDB ID
3dGzs
Method AlphaFoldv2
Resolution 76.37
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50