Protein

Protein accession
nys7 [EnVhog]
Representative
3TDyB
Source
EnVhog (cluster: phalp2_31499)
Protein name
nys7
Lysin probability
99%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MTYTEFKNKYNGRKVDYDGAYGAQCWDLGQYYFTKVLGLPASVLSGCGLVSNMLKGKKFELMKKYFDIIPKDKIQQGDVVIWNYGHIAIFDSKKNGVNYYFSQNPNAPKVMTVNNNTYTVFRLKGKEQVVSATKFKVGDKVVINGSLYKTSSSDEATRSVSNKTTVVTRVAPGAKHPYNTTGDLGWMDESSIQLVSNPSSSTSTSSETTSASTNTSYYPKSSYTGTSITTALAQLGIDNSKDFRAKIAKVNGITNYAYTAAQNTKLLNLLKQGKLKKV
Physico‐chemical
properties
protein length:278 AA
molecular weight:30604,3 Da
isoelectric point:9,62
hydropathy:-0,46
Representative Protein Details
Accession
3TDyB
Protein name
3TDyB
Sequence length
290 AA
Molecular weight
34144,73800 Da
Isoelectric point
5,17430
Sequence
MTYEEFKNKYNGKWVDFDKYYGAQCWDLAQYYFTECLGLPSSVLSGCGLVSNMLYQPKRAELDKYFDEVDTRDMHPGDVCIWEYGHIAMFDHWDGRSCWYFSQNYPLNSNSHLQAIPESDVHAFRLKRAKEVTPNVERDKYKNQIEVKVDNLRVREEASLNGNVLGYAKIGFYNFYETKDSDGYKWYKIADSQWVASKDEWVAVYPAEQHQNDYINLPDWIDERCIFDINTKEMLPQTLKPAKFNGLSYKVYSYVDEFAEIETRDYGRVLVKVTGATPITHEPQYKNGNY
Other Proteins in cluster: phalp2_31499
Total (incl. this protein): 20 Avg length: 231,5 Avg pI: 7,08
Protein ID Length (AA) pI
3TDyB 290 5,17430
1gyNk 215 9,48299
21FFu 243 4,58068
23G7I 246 4,85555
23GpQ 247 4,95053
24qiV 244 4,54686
24sxe 215 9,46855
2c7Kw 227 9,13248
3WLSR 260 5,06387
3WLmQ 238 5,14060
3ZHWJ 302 8,47722
3h6yn 189 4,83429
4JZsj 180 6,89169
4LcGE 168 9,00651
4OgmB 257 5,65329
5l95 215 9,45501
82C2s 215 9,45482
834BD 221 7,54097
a70n 180 8,25738
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23555
7sVyK
 88 25,8% 205 6.455E-15
2 phalp2_6760
41qyj
 19 26,0% 303 1.167E-14
3 phalp2_36941
a1Sd
 42 27,9% 261 2.837E-14
4 phalp2_39669
6VLbS
 1 26,4% 189 1.018E-11
5 phalp2_36270
68r1
 10 26,2% 213 1.883E-10
6 phalp2_40070
41p3c
 4 22,4% 218 3.439E-07
7 phalp2_34225
35z4C
 4 24,2% 223 1.882E-05

Domains

Domains
Unannotated
Unannotated
Unannotated
Representative sequence (used for alignment): 3TDyB (290 AA)
Member sequence: nys7 (278 AA)
1 290 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
nys7
Method AlphaFoldv2
Resolution 84.03
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3TDyB) rather than this protein.
PDB ID
3TDyB
Method AlphaFoldv2
Resolution 93.40
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50