Protein

Protein accession
lPbs [EnVhog]
Representative
5m3bR
Source
EnVhog (cluster: phalp2_9052)
Protein name
lPbs
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
QFTNDTWAGCLKALNLPDFSPESQNKAAIYLTQRRQNALEDVKAGRFSVAIQKCKKEWASFPDANYPGQGTRTVAQMQQWFRDGGGTIVA
Physico‐chemical
properties
protein length:90 AA
molecular weight:10039,2 Da
isoelectric point:9,10
hydropathy:-0,61
Representative Protein Details
Accession
5m3bR
Protein name
5m3bR
Sequence length
89 AA
Molecular weight
9962,11740 Da
Isoelectric point
8,62041
Sequence
YQFLYSTWKECQKALTLSDFSEVNQDKACLYLLKRRRALDDVETGNFTSAIAKTNTIWASLPGSPYNQNPKDFGTALALYKQGGGTFIA
Other Proteins in cluster: phalp2_9052
Total (incl. this protein): 2 Avg length: 89,5 Avg pI: 8,86
Protein ID Length (AA) pI
5m3bR 89 8,62041
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10564
8jDjT
 69 42,3% 85 5.964E-20
2 phalp2_15532
8vLOB
 4 36,9% 84 3.123E-16
3 phalp2_36755
6Dasn
 15 40,9% 66 1.780E-13
4 phalp2_16154
4tLR7
 1 37,0% 81 1.641E-12

Domains

Domains
Unannotated
Representative sequence (used for alignment): 5m3bR (89 AA)
Member sequence: lPbs (90 AA)
1 89 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
lPbs
Method AlphaFoldv2
Resolution 95.52
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5m3bR) rather than this protein.
PDB ID
5m3bR
Method AlphaFoldv2
Resolution 94.01
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50