Protein

Protein accession
lDgk [EnVhog]
Representative
13d0W
Source
EnVhog (cluster: phalp2_28303)
Protein name
lDgk
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSIQSVDFVRFAVEKAFRQPPVPYAIGKRSDTLGTDCSNLVWWMYQLAGGKDIRAGSNSIWDSHVIDKRWCDDGGSRKYGGDLQPGDLLFIDYGEPVTRNANGTPGKMDHVGIYVGPMPGAKTPDGKAGTVVHASLSQKFVVFSEIPTSFIRWTHKGRLKLLTYDMGKVDWTNPDIRVDVPLTPDPPPSLDPGPGEVMIVTQESPGARMRKQPKIVNNPTNAICEVPRGTILPIIEGNGEWTMVPFGIHRGWIRNDLLRFG
Physico‐chemical
properties
protein length:261 AA
molecular weight:28840,7 Da
isoelectric point:8,38
hydropathy:-0,36
Representative Protein Details
Accession
13d0W
Protein name
13d0W
Sequence length
267 AA
Molecular weight
28084,90510 Da
Isoelectric point
9,04835
Sequence
VAKTVTAAAFVQKAVELAKLHPPIPYVLGGRARAGTDCSNLIRLILKELGASDIQAGSNAMWASHVTNKAFIHAGGNFRGGGHLAQGVLLFMDYGTPANQTATGTPGKMDHMGIYVGPVSGLVTPDGKQADVIHASASRGIVCGSTLKNAWTHVAHLKGMIFDEGGTLGLVDMGPANPAGSLPNNPAPPKALGQGQARVITTTSGLYLREGPHTKYRRIKEMPIGAIVEVVHIQDGWANVRWDVRPGLYHTGWCCVGENGVQYLELG
Other Proteins in cluster: phalp2_28303
Total (incl. this protein): 2 Avg length: 264,0 Avg pI: 8,72
Protein ID Length (AA) pI
13d0W 267 9,04835
Similar Clusters

No similar clusters were found for representative 13d0W.

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 13d0W (267 AA)
Member sequence: lDgk (261 AA)
1 267 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
lDgk
Method AlphaFoldv2
Resolution 48.92
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (13d0W) rather than this protein.
PDB ID
13d0W
Method AlphaFoldv2
Resolution 61.30
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50