Protein

Protein accession
2Ld5M [EnVhog]
Representative
2Ld5M (this protein)
Source
EnVhog (cluster: phalp2_34191)
Protein name
2Ld5M
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VLRLCNILLFILILVFIMNVEQKEKIIKNRPEEVLAMTLYGEARGAPYKAKLGMARVMMNRVKDGRFGSSIEDVVTKPKQFSCYNDGDPNLDEILIVADDFEKAFDINIYLRDCYNAAMTVLSGKDDTPVKESLYYHTDKVNPKWNKKLKLEAKIGNTLFWKE
Physico‐chemical
properties
protein length:163 AA
molecular weight:18772,7 Da
isoelectric point:8,36
hydropathy:-0,23
Other Proteins in cluster: phalp2_34191
Total (incl. this protein): 16 Avg length: 151,9 Avg pI: 8,52
Protein ID Length (AA) pI
1D7d5 153 6,56288
29bQ5 137 8,69151
2Lkic 187 7,10007
2aQBQ 151 9,72082
36oid 150 9,25555
3A2Cv 151 9,01096
455NR 148 7,70802
6WX1c 150 8,21413
7G0Ei 150 8,56425
7J5cs 150 8,81484
7nF7Y 137 8,69151
7qOMw 147 8,60790
8b3V 151 8,59862
fC4i 151 8,97266
jHey 155 9,41060
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1814
3e6oo
 35 32,0% 156 2.307E-40
2 phalp2_18469
6HUO8
 1331 38,1% 131 1.011E-38
3 phalp2_22076
5Jkik
 65 34,5% 142 1.939E-35
4 phalp2_36008
5BafP
 56 35,6% 129 1.161E-33
5 phalp2_3473
4dQaD
 481 36,2% 135 1.590E-33
6 phalp2_9362
d74V
 1 34,0% 144 4.088E-33
7 phalp2_5410
2GVbS
 418 34,0% 135 8.676E-28
8 phalp2_33351
6EZbA
 5 29,1% 158 2.008E-26
9 phalp2_15439
40vWj
 11 32,1% 137 5.152E-26
10 phalp2_8528
1rrcd
 232 34,5% 142 1.322E-25

Domains

Domains
Hydro_2
Protein sequence: 2Ld5M
1 163
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07486

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2Ld5M
Method AlphaFoldv2
Resolution 94.33
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50