Protein

Protein accession
d0ji [EnVhog]
Representative
3LwuQ
Source
EnVhog (cluster: phalp2_1549)
Protein name
d0ji
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MQKRSPKNVKVIDVSHHNGKINWTKVAMDGVKGVYIKLTEGTSFLSKTAYSNYLGAKNAGLRVGFYHYAHANNDPIEEVNFFLKKLGNMKVDLPHCLDLEENKGKSKSQVNAFALKWMDYLQKKTGITPILYTGYSFMNNFTSAMAKYPLWVARYAGGSKRVQGFDAPGSSTIWRTWAMFQYTDSGKVKGISGNVDINEMDLDFFKSIDSGVVVIGDANPPSSYRKGDSGLGVKELQQKIMKLGYTLPKYGDDGSXGDEMVSAVKAFQKANGLLDDGIVGEKTLAKIDDLIKELNKPKEEDLPKVTSLGDKYSFQVKTKVAAGVYKYSNLAEKQKVIAADTIFSVYGYTENVKAWAVPGGFVMANQVEPLPVTLTTGGLSKEMEAEFRAFLKGEGIDSELNVHAKGNPSAEITVSGLQLVKVRQFLDLKGWYYK
Physico‐chemical
properties
protein length:434 AA
molecular weight: Da
isoelectric point:9,14
hydropathy:
Representative Protein Details
Accession
3LwuQ
Protein name
3LwuQ
Sequence length
447 AA
Molecular weight
50121,50740 Da
Isoelectric point
9,18625
Sequence
MVMQFIERIKRGEMMQSRSKQNVLGIDVSHHNGVVNWKQVAADGYKFVYLKLTEGKSYVDKTTYNNYIAAKNAGLRVGFYHYAHVTNHPVDEVNFFLQKLGQMKADLPHCLDLEESKGKSKTQISTFALQWMEYLQKKTGITPILYTGYSFLSNFTNTVAKYPLWVARYSGSNRVKGFNSPGSSTIWRSWAMFQFTDSGKVSGIKGNVDINEMDLTFFKSIDSGINLVGDVNPPSSYRKGDSGLGVKELQQNLLKLGEQLPRYGADGSFGNELELAVKAFQARNDLTSDGIAGKDTLALIANQINELNKPDEKDLPKVTSLGDKYSFQVRAKKDIGVYKYSNLAVNQRILKKDTVFSVYGFTEGFKAFAVPDGFVQAKDVDTIPITITTGGLSQKMENEFRIFLKNEGINSELNVHAIGNPSAEITVSGLDLVKVKKFLDEKKWWYK
Other Proteins in cluster: phalp2_1549
Total (incl. this protein): 17 Avg length: 425,8 Avg pI: 8,91
Protein ID Length (AA) pI
3LwuQ 447 9,18625
2LNpo 427 9,30055
2Yks9 433 7,64197
325Av 430 8,63543
3LlGs 428 8,77152
3LlX1 426 8,76759
3Lwcx 434 9,26129
3zDZx 426 8,89214
4e1P0 433 9,13338
7tcQh 435 9,11862
7z9wg 435 9,24678
7znV5 435 9,00335
d056 434 8,64761
A0A0A0RV08 394 9,03023
A0A516KMM6 394 8,90761
A0A0Y0AL50 394 8,85533
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_11028
4SVWb
 1 35,6% 320 1.455E-54
2 phalp2_39458
4VDTp
 155 30,0% 319 3.503E-43
3 phalp2_34359
474YH
 38 32,6% 291 3.641E-40
4 phalp2_12020
7Olig
 697 32,6% 294 1.074E-34
5 phalp2_5981
6El6s
 21 33,3% 294 6.424E-34
6 phalp2_8212
7pFe1
 1 30,2% 337 6.424E-34
7 phalp2_2537
6a7No
 192 28,6% 345 4.058E-27
8 phalp2_35723
3WLH4
 2 29,2% 291 5.639E-26
9 phalp2_12693
24JaA
 16 31,8% 305 1.011E-25
10 phalp2_14288
3xQM7
 130 25,3% 382 1.443E-20

Domains

Domains
GH25
PG_1
Unannotated
Representative sequence (used for alignment): 3LwuQ (447 AA)
Member sequence: d0ji (434 AA)
1 447 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3LwuQ) rather than this protein.
PDB ID
3LwuQ
Method AlphaFoldv2
Resolution 88.50
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50