Protein

Protein accession
bmde [EnVhog]
Representative
5jaYr
Source
EnVhog (cluster: phalp2_39494)
Protein name
bmde
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAAFIDDNGFSSDFYENLLDASIVGKFEPEWLLAMMCSESGLNPKAYNGNGGASGLSQLMPATLKDLGWFPGNEDYDSVKGIFRELAPEKQIHWTASYFEDWRRRYRIDHWQSRSQMYLVNFLPADLPGGTDPNRVLVTRDGLPSIYNPNRGLDHGNKGHITVGDLELAIAHATRCNARVYETALDSLDRVKRMREDTDPQGIGHEDDEMQASVEEDPVCRNS
Physico‐chemical
properties
protein length:223 AA
molecular weight:25102,6 Da
isoelectric point:4,76
hydropathy:-0,61
Representative Protein Details
Accession
5jaYr
Protein name
5jaYr
Sequence length
261 AA
Molecular weight
28607,28800 Da
Isoelectric point
7,02339
Sequence
MIIRHTSDLNASFFENLKPIAIELGATPIDMLSVMFSESGCRANAHNDAPKDLPPEKRWNASGLIQFMPATLMGLGWTHGHAAFRQLTAAEQLPYVRRYYLPYRGHLGSVAGLYVATFLPALVKHCDDPSFILTAKNGPLGWAYGPNAVFDTNRDFAITVGELEDAVRRNARGARWDEIVTRLTGIEPTEAPSNDNPDVRSVRGIQIALARLGFDPGPADGIAGPRTREAVLAFQRWSMIRQDGIVGPQTRAALESALAMR
Other Proteins in cluster: phalp2_39494
Total (incl. this protein): 16 Avg length: 262,4 Avg pI: 6,21
Protein ID Length (AA) pI
5jaYr 261 7,02339
1Q6c3 188 6,06230
1dyTD 256 5,94856
1ftUL 252 6,97184
1oEJZ 260 4,86118
240bY 258 5,81107
4DvTG 309 4,62780
4fAIO 272 5,83705
4fdPp 252 9,12442
4g310 273 9,02514
4gQHA 263 8,35815
6Du2x 293 5,62992
8njrB 248 4,78064
8pNKy 300 5,28014
wcYj 291 5,25223
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_14633
5Bp8l
 10 42,9% 184 3.612E-55
2 phalp2_15005
6XO7m
 5 29,6% 189 2.630E-25
3 phalp2_5989
6FATD
 3 25,1% 270 2.573E-21
4 phalp2_17347
4AJyG
 1 29,0% 200 1.603E-20

Domains

Domains
Unannotated
PG_1
Representative sequence (used for alignment): 5jaYr (261 AA)
Member sequence: bmde (223 AA)
1 261 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5jaYr) rather than this protein.
PDB ID
5jaYr
Method AlphaFoldv2
Resolution 90.57
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50