Protein

Protein accession
b8By [EnVhog]
Representative
5kh9P
Source
EnVhog (cluster: phalp2_37969)
Protein name
b8By
Lysin probability
96%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSSNATLDRFWAAFKAHEPDVEFGGIDADKPGYHNQRRRLPGDDYSVGQVAADRRGADDVAAAIDITLPAAKMRLYTGRLQSAALTHDPRLWLYSGPTLREYIGTTNGRDVECYVFTGGRPLGVAGDSGFDFGRDTSHLWHIHLSVIRQYAEDWAALDAVLSVLKGESLAAWRARTQEDDVGTLEGDQAKQLAYNDVREEAWAKGSESIRQTPVAPAGGTHWGVTTLAGVARTVTQLAADVAEIKARPAPGTVEISDEQLERVLRKVIGSVDGATPQA
Physico‐chemical
properties
protein length:278 AA
molecular weight:30111,1 Da
isoelectric point:5,29
hydropathy:-0,38
Representative Protein Details
Accession
5kh9P
Protein name
5kh9P
Sequence length
255 AA
Molecular weight
28191,04400 Da
Isoelectric point
5,52284
Sequence
MATNPNPQRISAAAWRFWEEFHAFEPASELGGIYVNKPGYHDYRAGLPSTDYSVEEVANDRKGSDQYASGIDITLPESKMKTYSSRLDKAFRAKDKRLFINGSPAVREFIGTLNGTTVYCYMLTGGIPQGVGSDSGVDYGRDTSHLWHIHLSIIRKFAAEWQIFSGLLSILKGQSYTDWEDDNMALTEDETEVAAGRGWHNQKIGKSDLTGGVAAQRTHNAITGGTGDEGALFRRLDDIERVQAEILALLKPPTN
Other Proteins in cluster: phalp2_37969
Total (incl. this protein): 9 Avg length: 268,7 Avg pI: 7,77
Protein ID Length (AA) pI
5kh9P 255 5,52284
16KWv 273 5,63828
1boVc 256 5,89457
1hFR9 290 7,85085
1zFER 242 10,02440
2gotq 279 9,94239
5H2zI 282 9,81030
7vX3w 263 9,96386
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_32023
5sN7E
 13 39,0% 205 5.370E-55
2 phalp2_24248
34Dzt
 16 37,7% 183 7.347E-55
3 phalp2_27886
fRFV
 4 36,8% 190 2.026E-49
4 phalp2_7562
5nBNF
 3 30,4% 197 1.242E-42
5 phalp2_11457
gyoz
 3 26,5% 188 2.126E-29
6 phalp2_24843
7tWjV
 17 26,8% 190 5.613E-25
7 phalp2_709
1FQzJ
 3 25,2% 206 8.907E-11

Domains

Domains
Unannotated
Representative sequence (used for alignment): 5kh9P (255 AA)
Member sequence: b8By (278 AA)
1 255 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b8By
Method AlphaFoldv2
Resolution 74.66
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5kh9P) rather than this protein.
PDB ID
5kh9P
Method AlphaFoldv2
Resolution 82.50
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50