Protein

Protein accession
YoDO [EnVhog]
Representative
1fv0r
Source
EnVhog (cluster: phalp2_15298)
Protein name
YoDO
Lysin probability
90%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MPVVPTATVPSVAPTESAGIGYQSSAAATPEAFGAGIGQAKLGLARQLETTGDMMASHALRMQEDANVTSSEKLFLDQDIKLSKLTDDYNSLQGSARVNALPQFHEDAAALREEGLQNAQNPDVKKKFDQLFTRQLGFSIKAAGRESASAFRADQKATSSSITANSMSTIAKNADDDQQFLSATQTALTSQRALPDYQGASEDTKLEMDRTIVSGAWTTRLQSMARNDPLRARDLFNKNKDSLDGISQLKLQDTINQQIINVQSRVDSDHIIQSGALVDTSLAERLKKLEGYSEKPYADFKQTSSGYGTKAQLGDENIPPEQRRAVYEQRLYTELGRAANIVDTFAPGLPTGTRNALISLTYNAGSAWTSSGLGSKIRSGDLEGAKQNFAQYNQAGGVVNPGLVDRRATELSWWGGEARDSDPTSQLGTALEKAKEQAIKVFPDDPGNQAKYLDTLQNRIKTDYSVLQAGVRDMQLQTRNIVQRELFDPDHHVVDYDHLSPKAQQAYDQAPPMLQKSFDDSMRRNSTADVPLTAERQSRFDTLRGESINEPDKFMSRDVSNEDLPRPQKSILLKAQADRKALVDKGAKLNSALSTIQPLLNDAQIGKSATDQNKNAEYNKFSGVFQKSLDDFYQEKKRPPTDKETREIGIQLLKTTVTGPGYFGSLFGDRSDRAYRVVADQTPIQLRSDNPASHYSEIPRHSIFIGPDGQKRVKP
Physico‐chemical
properties
protein length:715 AA
molecular weight:78625,5 Da
isoelectric point:6,05
hydropathy:-0,69
Representative Protein Details
Accession
1fv0r
Protein name
1fv0r
Sequence length
725 AA
Molecular weight
79418,83900 Da
Isoelectric point
6,21338
Sequence
VPAVPSPSVPSVAPSGQAQPYQSAAGASPEAFGAGIGLAESHLGAGIENLGNVLEKHALKMQEDVNVSHAEELFLHGDTQLSTLTETYTSLQGAARVNALPKFMEDAAKIREEVKAQAPNPDVAKKFDQLFTRQLGYSIKDAGRLAGTANRQYQKETSNAVVANSMSNIAKNADDDQRFLASTQNALTSQRNLPEYQGASDETKLQMDRAIVDGAWGTRLQAMAKDNPLRARELLNKNKASLSGETELKIKPIIDQEIIRRDTKVQSDQIINDVGIGTMEERVKRLEGYTEKASWDYKQMSSGYGTRSQPGDENIPPDQRKAVYTQRLRNELGKAYQIVDNFAPGLPKGARDALADLTFNAGEKWTQEGLGQAVRAGDLERAKSILPMYNNVTEPSGVKHPLQNLTERRAEELRWWNTDTGSAIDTAGLTSKALDKAKERSIQVFPDEPANQAAYLDTLQQRIVGDTRIMQNAARDSQHQVRNVVMNELIDDKKNITTVDQMSDAAQAAYNSAPQGLRGIFDARMRKNMSADVPPSNAGAKRFLQISGMASYDPEGYADLNIDNEPLLTRGQKQTLTLQQQQTAANVKRGIAVDGAMKSMHPFLNDAGISDSATDKGRRDGYLQFRGAFEAAINAEMAEKKRKLTPKETTDIGQGLLKEEVTDPGWIGGWVPFTSTRQRPYQFEVRKGSEEADFAKIPAGAVFKHPNGSYRIKPGIRSVEDQSGG
Other Proteins in cluster: phalp2_15298
Total (incl. this protein): 6 Avg length: 717,3 Avg pI: 6,63
Protein ID Length (AA) pI
1fv0r 725 6,21338
1XlMu 717 7,06528
1pmcb 717 8,65941
6J0A7 715 5,73741
QLeo 715 6,04763
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_9208
6Khmv
 1 23,5% 714 6.180E-66
2 phalp2_27696
6KMfv
 2 23,4% 686 6.131E-57
3 phalp2_2664
6WyWF
 26 21,2% 730 3.572E-56
4 phalp2_36560
1KE5h
 1 23,3% 701 1.293E-52
5 phalp2_29374
16DSF
 1 21,0% 716 1.411E-42
6 phalp2_40089
83AAc
 1 21,3% 704 1.023E-40
7 phalp2_8998
3V2z7
 1 22,6% 684 7.509E-40
8 phalp2_22166
6IaX2
 64 22,0% 608 1.326E-39
9 phalp2_37817
4EYyO
 24 18,9% 693 1.389E-33
10 phalp2_23069
4jHRv
 6 18,7% 719 5.370E-32

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1fv0r) rather than this protein.
PDB ID
1fv0r
Method AlphaFoldv2
Resolution 80.78
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50