Protein

Protein accession
1Lmiv [EnVhog]
Representative
8aN1m
Source
EnVhog (cluster: phalp2_14058)
Protein name
1Lmiv
Lysin probability
96%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTVGRAYAVPQDGHSQIETITPSVVEEAVIPAPTVEPVSQPEAERPPEPIVETVAATVILPVGCGNYTHMIAQYDWNVNVATAICQAESSGNPIAIGDNYPINGLHAPSCGLFQVRTLASRPSCSELQDPSTNIAWAYKVYKGQGWYAWSVCKTKVSCY
Physico‐chemical
properties
protein length:159 AA
molecular weight:17109,1 Da
isoelectric point:4,89
hydropathy:-0,07
Representative Protein Details
Accession
8aN1m
Protein name
8aN1m
Sequence length
179 AA
Molecular weight
20001,50030 Da
Isoelectric point
6,31080
Sequence
MFRYLATALLIWVVAPDFNKQPDDKKPTETVMAHQVQLAQEIEEPNLSKKEEAVKQVEKPAEPPVQESQSIPTQDTPKQTGCEEYRSEIAKYDWDINLMTAIMKAESGCRTTAVGDDRVIGGIHAPSCGLFQIRTLSSRPSCSALKDPATNIAWAYRIYQGQGLKAWSVYSNGAYKKHL
Other Proteins in cluster: phalp2_14058
Total (incl. this protein): 13 Avg length: 180,9 Avg pI: 8,28
Protein ID Length (AA) pI
8aN1m 179 6,31080
11HT0 174 9,35154
1IF0K 208 9,14705
1fRIm 209 9,09702
3rl3t 207 9,09670
4IsiG 165 8,88679
66C0T 187 8,93727
6vIM8 155 9,42639
80BN3 176 9,31492
8e6V3 176 9,31492
8iQta 209 9,22473
ODa9 148 4,59642
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25292
8dpXv
 5 45,1% 124 2.436E-31
2 phalp2_26131
93au
 7 38,2% 162 6.820E-26
3 phalp2_19789
4UjGK
 12 36,0% 133 3.990E-24
4 phalp2_29789
1Ou3b
 5 36,7% 117 1.056E-18
5 phalp2_37443
2Ld6Z
 8 36,3% 121 2.687E-18
6 phalp2_32069
5Nsjh
 22 33,3% 135 3.880E-16
7 phalp2_39764
hHso
 3 34,1% 117 3.400E-15
8 phalp2_2152
3Guf6
 27 30,0% 133 2.970E-14
9 phalp2_27607
5OcqN
 31 27,7% 184 1.897E-13
10 phalp2_6812
8hy2c
 3 29,3% 174 2.583E-13

Domains

Domains
Disordered region
SLT_3
Representative sequence (used for alignment): 8aN1m (179 AA)
Member sequence: 1Lmiv (159 AA)
1 179 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18896

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1Lmiv
Method AlphaFoldv2
Resolution 81.41
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (8aN1m) rather than this protein.
PDB ID
8aN1m
Method AlphaFoldv2
Resolution 78.61
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50