Protein

Protein accession
YdtS [EnVhog]
Representative
4J96O
Source
EnVhog (cluster: phalp2_28741)
Protein name
YdtS
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VTINFKPSPNFDTNRKPIDRIVIHWFGIGTLASANKRFLDPNSGVSAHYGISDKTVYQWVLDKNVAYHAGNYEMNQRSIGIEHDAGIDPAHDLSEASYNTSGELIRIVCERHSIPLDREHIIAHKEVKATQCPGTVDINRLISIAKGGDLVFTSKTKVPIGGVWGEPELQALRSILNDQKRSIDSLSKDSDKLKGDVLKLTEEVNKLKSSVKEGFSNPIANLFYQVALAFEK
Physico‐chemical
properties
protein length:232 AA
molecular weight:25752,9 Da
isoelectric point:7,23
hydropathy:-0,37
Representative Protein Details
Accession
4J96O
Protein name
4J96O
Sequence length
249 AA
Molecular weight
28157,46860 Da
Isoelectric point
8,29813
Sequence
MNIIQKPSPNYDSNRLPITKILIHWIVGNLSTADAQFAKPNSTSAHYGIENNEVHQYVQENKVAYHAGNYPFNQRSIGIEHSAAPDRPATEETYKTSGQLVREIAARYNIPLDRQHIMRHSEVVATQCCGTIDIDKIISYAKQGTQPPMDNEAKLRLRAKVSVDNILNYLRDTKLRDQKGEQYVENAASELWLDTDSDPKFLGLMKRIFRDYAGLQITGYCSPAELAKAKEEGRKQGRQEIKDIVKGLA
Other Proteins in cluster: phalp2_28741
Total (incl. this protein): 14 Avg length: 251,6 Avg pI: 6,94
Protein ID Length (AA) pI
4J96O 249 8,29813
1MIN6 322 6,26544
1dYrV 255 4,71630
2V2tt 234 7,04294
2v7YQ 236 8,87519
42ibW 329 7,57143
4UnXi 227 9,34316
5BlsT 303 5,72905
5EHTO 186 6,58414
5I5X9 249 6,29420
6wWhl 247 6,54242
8ahr3 241 6,44943
8njBz 213 6,15114
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24069
8amt4
 8 42,9% 163 4.301E-61
2 phalp2_1360
1dwl8
 1 35,4% 186 1.241E-31
3 phalp2_28446
1NmkF
 2 33,9% 171 1.172E-26
4 phalp2_28639
8jnfC
 92 34,2% 175 2.563E-25
5 phalp2_1963
4Ak2c
 1 25,6% 179 1.031E-23
6 phalp2_24196
2CPdw
 1 27,0% 211 2.587E-21
7 phalp2_29674
8k36v
 96 26,7% 262 7.226E-18
8 phalp2_31988
59Np4
 130 27,9% 197 5.042E-16
9 phalp2_16559
7s5Uq
 12 25,5% 215 8.469E-14
10 phalp2_38112
6KhfV
 6 23,2% 189 4.803E-10

Domains

Domains
Ami2
Disordered region
Representative sequence (used for alignment): 4J96O (249 AA)
Member sequence: YdtS (232 AA)
1 249 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4J96O) rather than this protein.
PDB ID
4J96O
Method AlphaFoldv2
Resolution 79.73
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50