Protein

Protein accession
Ydj6 [EnVhog]
Representative
6XdQj
Source
EnVhog (cluster: phalp2_3919)
Protein name
Ydj6
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTRFLLTLAISLTIAFTVAVTAVQIEPQTEPMPSETTITTKDEEKPLKPAESKPEPAPKPEPVVQTGSTQQIKASIIKWADHYGLSSTRMLRIANCESTFRPSAVNYNYYAGGGHPTGLFQYLPETWNRIGSRSPYGVGDIWNYEHQSRVTAWAFANGYAGEWACK
Physico‐chemical
properties
protein length:166 AA
molecular weight:18427,6 Da
isoelectric point:6,83
hydropathy:-0,40
Representative Protein Details
Accession
6XdQj
Protein name
6XdQj
Sequence length
143 AA
Molecular weight
15679,58120 Da
Isoelectric point
5,83403
Sequence
MCLPHVVMADTDVDMVPLATDTQSQTPPDSGLNTSPPSEPGLQETTPAHPTVQEMIVQASIRWGLPPSRMLRIARCESRLGTDPNAYNGRSGHYGVFQFSPRTWAYASVRAGYVGASPLNDYTNIEVAMWLMKNVGPSQWTCK
Other Proteins in cluster: phalp2_3919
Total (incl. this protein): 2 Avg length: 154,5 Avg pI: 6,33
Protein ID Length (AA) pI
6XdQj 143 5,83403
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3032
1Mb2P
 1 30,8% 107 6.263E-17
2 phalp2_40133
8aLuv
 6 32,3% 105 5.630E-16
3 phalp2_25250
45anp
 2 28,7% 94 2.640E-12
4 phalp2_4654
4zY2I
 6 29,1% 103 3.608E-12
5 phalp2_35598
1eFKR
 23 30,0% 103 1.258E-11
6 phalp2_37046
PPNV
 8 36,1% 94 4.382E-11
7 phalp2_34891
4fZxi
 5 29,3% 116 9.875E-10
8 phalp2_39236
3OIF2
 4 29,2% 113 3.425E-09
9 phalp2_38723
Yfb0
 16 26,5% 94 6.376E-09
10 phalp2_15131
8Cuoh
 16 33,0% 118 2.206E-08

Domains

Domains
Disordered region
Unannotated
Representative sequence (used for alignment): 6XdQj (143 AA)
Member sequence: Ydj6 (166 AA)
1 143 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
Ydj6
Method AlphaFoldv2
Resolution 81.52
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6XdQj) rather than this protein.
PDB ID
6XdQj
Method AlphaFoldv2
Resolution 75.99
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50