Protein

Protein accession
Y4sM [EnVhog]
Representative
4FVbI
Source
EnVhog (cluster: phalp2_1989)
Protein name
Y4sM
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTKLLHPIQDFKWKKNISQMFGQNSAIYMKNFGIPNHNGLDYVVQDSKKGYGTPILAAHDGVVEKIAYDVPHRTRGNGIYILSSDGTFSTCYWHLSSFLVNLGDKVQAGQTIGAMGNSGWVLPRPTKHNIHAGTHLHFGVREHGTQNRYGGFVDPTPYLYEIGDELPLFFFRDLFVGKSGNDVSWLQTLLHLEGLAGDYSKYDFFGPKTLRDCIKLQKKHGLSPTHGFVGPKTRSLLNGRY
Physico‐chemical
properties
protein length:241 AA
molecular weight:27044,4 Da
isoelectric point:9,28
hydropathy:-0,39
Representative Protein Details
Accession
4FVbI
Protein name
4FVbI
Sequence length
252 AA
Molecular weight
29094,59220 Da
Isoelectric point
8,88692
Sequence
MNLPFIEPKNNNNISQYFGENGNIYSRFGLRGHNGLDFAVPKGTKILAMVDGYVWRTGKDKDGYGIYVGTFTDLGNRKMDIVYAHMEKANVVLNQKFKAGDVLGFVDSTGFSTGNHLHLGIRFWQNNAIVNYNNGFLGYLDPYPLLNDKISWTNYWNWKKITGGTIAEYEQVPIGNKYNQNISDYEMMKILPWASWVWIFNEIKRFPSYNELIALTCGRWDFNAVFKGRVGDWFKYYTKSEYDERIKNGGGL
Other Proteins in cluster: phalp2_1989
Total (incl. this protein): 10 Avg length: 251,8 Avg pI: 8,42
Protein ID Length (AA) pI
4FVbI 252 8,88692
2va4t 229 6,15898
3U1Da 257 6,23861
3nkrw 265 6,60301
45K0w 271 9,27141
45K2q 287 9,52909
4i8vi 261 9,38732
4iIqA 209 9,11333
8fNAG 246 9,69619
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28936
5ElVQ
 38 28,9% 269 1.479E-50
2 phalp2_36749
6BXWz
 16 31,5% 257 3.386E-49
3 phalp2_25409
2zmTv
 9 29,7% 205 4.718E-31
4 phalp2_34242
38EvY
 3 24,4% 278 2.307E-28
5 phalp2_32733
8iF6d
 6 27,5% 189 2.006E-27
6 phalp2_20028
1oELM
 3 31,3% 166 6.052E-24
7 phalp2_27080
2sOSf
 6 21,5% 176 1.784E-12

Domains

Domains
PET_M23
Unannotated
Representative sequence (used for alignment): 4FVbI (252 AA)
Member sequence: Y4sM (241 AA)
1 252 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
Y4sM
Method AlphaFoldv2
Resolution 95.83
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4FVbI) rather than this protein.
PDB ID
4FVbI
Method AlphaFoldv2
Resolution 76.45
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50