Protein

Protein accession
1Lft3 [EnVhog]
Representative
6U8Ra
Source
EnVhog (cluster: phalp2_7736)
Protein name
1Lft3
Lysin probability
99%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MARRPVNAPYTITTQFGVPDNYAKFGRHSGVDYAVPLNRPVYAPVSGQLTNIVSPTGGNMVQIFDGKYYHRLMHNNSFSRGNGPVNEGNEVAKAGTTGLSTGVHSHWDVATKATPTSFADFIDPNAILNNQGGSAMGVPNEDGWYSRFRQLTKQIRGRDMSREEFAKNIVPARDPFNAVEILSDNPEAHANTEFADYGRRSRQESWEDRTKLLEQDRDNNLYPLIEAMKKQLADSNAMVDTLKAKAYLSDTLQAKVEELTVQNEKLVNREVEANKTGNAFIQWIGNLFNNFRS
Physico‐chemical
properties
protein length:293 AA
molecular weight:32762,0 Da
isoelectric point:6,61
hydropathy:-0,67
Representative Protein Details
Accession
6U8Ra
Protein name
6U8Ra
Sequence length
218 AA
Molecular weight
24509,58190 Da
Isoelectric point
8,40747
Sequence
MRIRCVGGRYQLTQPYGYDKNYPLNGGWHTGVDYVSPDLKILAPDVATVVAIGQDTTNGQYIILESGVYRDYFCHLASYIAVQGQKVTKGQSIGIMGKSGYATGVHVHHTLRVNGQQSDPELFIGKGVIMIEDNDLWFTRFYKLVRQLQGRDLTRAEFRINFVGFDAFKITESLSDNIAADKALFAQDLGQKAITEDWQGQINGKYILVTESIYRKVK
Other Proteins in cluster: phalp2_7736
Total (incl. this protein): 7 Avg length: 227,4 Avg pI: 6,74
Protein ID Length (AA) pI
6U8Ra 218 8,40747
1daxD 191 5,19283
4mved 206 5,13361
6PEaT 207 9,04216
7wcra 233 6,71043
8oDUl 244 6,07873
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25537
3nGXJ
 39 35,1% 145 7.387E-26
2 phalp2_25593
3WFbK
 1 28,7% 139 3.343E-18
3 phalp2_5933
67ENK
 29 29,1% 144 5.225E-15
4 phalp2_38858
1KtXW
 8 26,4% 136 8.117E-14

Domains

Domains
PET_M23
Unannotated
Representative sequence (used for alignment): 6U8Ra (218 AA)
Member sequence: 1Lft3 (293 AA)
1 218 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1Lft3
Method AlphaFoldv2
Resolution 63.85
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6U8Ra) rather than this protein.
PDB ID
6U8Ra
Method AlphaFoldv2
Resolution 80.77
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50