Protein

Protein accession
Rzdl [EnVhog]
Representative
5kiHy
Source
EnVhog (cluster: phalp2_30510)
Protein name
Rzdl
Lysin probability
76%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTSTVDYSYTYVGAPTIAGAGYVGAERYLGYDGRCLTATERDELLAHGVGIGLIWETAADRSLDGYWAGYNDAASANSYADGLGAPVVSIWYATDFHASASQIAGPIHEYYCGVRDFGGREPRVYGGAPVIDHCVWHIAGFGPGWQAAAASWSNYTLSPNACLLQEVQQIWNGAADTNVVLCPDGDIDWLWGREGDWFDMATKDELREVVTEVVNDVLSRMYTGSRPITIPDDPGVYELTFDAEGRRVRRLIPTWDEINALRYVDAMAEADWLGTTRAVTDPAQVAAIRALPVVHPAGAGTVTATAGDPPA
Physico‐chemical
properties
protein length:311 AA
molecular weight:33546,8 Da
isoelectric point:4,40
hydropathy:-0,11
Representative Protein Details
Accession
5kiHy
Protein name
5kiHy
Sequence length
300 AA
Molecular weight
32531,10860 Da
Isoelectric point
4,72175
Sequence
MSFPAVVDYSYGRPSMQSIQDYGAAGAMRYLGNDGRCIGASERDQLLGAGLGIGLIWETTAQRPLDGYGAGQADARSANTYADNLGAPHVPIYYAVDFAPSSSQLTGPIADYFRGVQSMGGRPMNAYGCAMVVQHLVRDLAMMSSAWQCAAWSYPGSAEGSPIYDGGYNLILSPYAHMLQNIGYVLGDTSDHNSLVSADLTFLWGKEGDWFDMATQDELRAIVADEVNKALKKLPVNAMWTDSKGQYEVTFNAEGQRVKRRIKSPDELNALKVARAISGDWVMDVTGDTTIFDSFPTVPE
Other Proteins in cluster: phalp2_30510
Total (incl. this protein): 5 Avg length: 311,8 Avg pI: 4,59
Protein ID Length (AA) pI
5kiHy 300 4,72175
34AM 325 4,31700
6QK28 316 4,39868
iEnV 307 5,12218
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_29274
idyR
 6 43,3% 210 9.176E-41
2 phalp2_8820
2pMjJ
 148 35,4% 209 1.532E-25
3 phalp2_12781
8asOL
 12 31,1% 202 9.490E-25
4 phalp2_4951
6F0j3
 21 31,2% 208 4.887E-23
5 phalp2_26981
4IkqB
 2 28,1% 259 4.056E-22
6 phalp2_21889
4ES0R
 40 30,0% 226 1.117E-20
7 phalp2_35595
1dXu3
 19 33,0% 215 1.509E-20
8 phalp2_32598
1MCc9
 1 28,7% 195 2.252E-19
9 phalp2_29146
7jwQQ
 36 28,5% 242 1.064E-13
10 phalp2_35870
4MXKW
 1 28,9% 211 1.994E-12

Domains

Domains
Rv2525c
Unannotated
Representative sequence (used for alignment): 5kiHy (300 AA)
Member sequence: Rzdl (311 AA)
1 300 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08924

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5kiHy) rather than this protein.
PDB ID
5kiHy
Method AlphaFoldv2
Resolution 87.04
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50