Protein

Protein accession
RJMp [EnVhog]
Representative
4uApd
Source
EnVhog (cluster: phalp2_18164)
Protein name
RJMp
Lysin probability
99%
PhaLP type
endolysin
Probability: 86% (predicted by ML model)
Protein sequence
PATGISDQLVNFVKSREGFTGKAEWDYHQWSVGYGTVAKYPNEVISEPEAANRLRSELGVHASSVDSAARNAGLQLTAGQRDALISYSYNTGAGKMKAIINSVNGDANKLSSAIGNGIKTAGGKVLTGLANRRAAEARLAAS
Physico‐chemical
properties
protein length:142 AA
molecular weight:14824,3 Da
isoelectric point:9,49
hydropathy:-0,32
Representative Protein Details
Accession
4uApd
Protein name
4uApd
Sequence length
181 AA
Molecular weight
20405,90060 Da
Isoelectric point
7,78554
Sequence
MASTVEVSNETVEFVKRFEGLRLTSYWDYHQWSIGYGSISYEGQTITEEQAARKLQGDLKKYATSLTAALYVTLLPDQETALLSAAYNLGVTGISRIIKVCNTGDFDAAAKLLRRYDHAGGEKLPALTRRREAEAKLLSRPRPRPVVVDTEMRGSPRVQYERTYYLMPPDASKQEFMDIAS
Other Proteins in cluster: phalp2_18164
Total (incl. this protein): 5 Avg length: 191,0 Avg pI: 7,51
Protein ID Length (AA) pI
4uApd 181 7,78554
34YBQ 234 5,06540
4cqDR 155 6,59391
8C9hA 243 8,62892
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2632
6RhYr
 14867 40,7% 140 4.925E-31
2 phalp2_28113
7zmZV
 50 41,2% 143 3.236E-30
3 phalp2_29738
1pBjt
 830 37,5% 149 7.446E-29
4 phalp2_4532
3QBcV
 9 37,6% 138 4.883E-28
5 phalp2_17663
6R9yG
 6 37,4% 147 5.987E-27
6 phalp2_33221
5jbqV
 447 38,7% 142 8.189E-27
7 phalp2_4451
31DIk
 4919 36,9% 146 1.532E-26
8 phalp2_34307
3A2Hz
 178 36,6% 142 7.331E-26
9 phalp2_3616
4NArk
 20 33,8% 142 1.003E-25
10 phalp2_6830
8n5Jv
 121 34,9% 146 1.371E-25

Domains

Domains
GH24
Disordered region
Representative sequence (used for alignment): 4uApd (181 AA)
Member sequence: RJMp (142 AA)
1 181 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
RJMp
Method AlphaFoldv2
Resolution 94.63
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4uApd) rather than this protein.
PDB ID
4uApd
Method AlphaFoldv2
Resolution 84.31
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50