Protein

Protein accession
RENC [EnVhog]
Representative
6SNir
Source
EnVhog (cluster: phalp2_4989)
Protein name
RENC
Lysin probability
96%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
GYHYVRSNVSAPSQADNLEQHIGDKSIPVMLDFEEGSGNIDVFWAVKKEIEKRGMKVRLSYIPDWYWERIGRPDLSQVPGLIASEYVTGTNYASTLYPGDNWHGWKAYGGRTPDILQFTSSARVAGLTVDAMAYRDTRENLERLLHGLPPDEGEDMTQYPSRSIYRDPDSKFRETQAGYVLNIDAMMHREMIERLAVTYHDPDAVSRVLAVAQGRGAEPNNADTIEHAKRVLQKIPFEVLEKNA
Physico‐chemical
properties
protein length:244 AA
molecular weight:27645,6 Da
isoelectric point:5,42
hydropathy:-0,59
Representative Protein Details
Accession
6SNir
Protein name
6SNir
Sequence length
300 AA
Molecular weight
32191,28320 Da
Isoelectric point
6,19814
Sequence
MIYGVDVHPQYQAGLNIEQVRAEGIDFMAVKLSEGTGTFGGLDWIRRGQACGLLSLGYHYLRSGNEVAQAAVFSQQLAAAGGVPGMLDAEAVTAVGQTPTLTVTGIHRFLDACTSNGARVPLLYLPRWYWQRMGSPDLSGLPTLWASSYVSGTGYASVLYEGVTPRFWAAYGGLPVAVLQFTDRALIAGQRIDADAYLGTRDDFTKLINTSAPLPPAPGPGPSSIPQVEYGQTNDTVMHLQAFMNRVFPAYSHLPVTGLYGDMTVAVLKEFQRRVGIVGADGRNCGPLTIAKLWEAGFRG
Other Proteins in cluster: phalp2_4989
Total (incl. this protein): 5 Avg length: 301,0 Avg pI: 6,26
Protein ID Length (AA) pI
6SNir 300 6,19814
4EsGN 267 5,78339
4zKLi 347 7,16208
6TKn5 347 6,72521
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25713
4FbaX
 14 57,0% 221 3.777E-82
2 phalp2_20034
1pbFu
 55 43,7% 224 2.342E-55
3 phalp2_33266
5EtB5
 7 36,4% 288 1.290E-45
4 phalp2_36898
7vYe1
 51 40,0% 225 3.277E-45
5 phalp2_8437
Ypuv
 26 36,7% 231 1.429E-41
6 phalp2_22258
7lGFm
 11 41,5% 214 1.705E-40
7 phalp2_14099
7owJl
 20 35,3% 226 1.825E-36
8 phalp2_10313
1lQkZ
 1 38,7% 222 2.486E-36
9 phalp2_1777
2SfqX
 42 34,3% 230 3.490E-32
10 phalp2_32493
1fUkE
 14 35,3% 243 1.390E-30

Domains

Domains
GH25
Unannotated
Representative sequence (used for alignment): 6SNir (300 AA)
Member sequence: RENC (244 AA)
1 300 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
RENC
Method AlphaFoldv2
Resolution 93.38
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6SNir) rather than this protein.
PDB ID
6SNir
Method AlphaFoldv2
Resolution 93.36
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50