Protein

Protein accession
1LShm [EnVhog]
Representative
4K5QO
Source
EnVhog (cluster: phalp2_16214)
Protein name
1LShm
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MGKVPKPNIVWRGAHPNNFTVGRPGGGLDGRNTFHHVVGTAESAVLVFNNPSRGASSHLVITDRPDVAAWQCVDFSNTAWCDGNWDSNLRTISMEHHGDWRFGYNNPQVLENSAQVVAWLRDQGLVSRYVRHRDVSKTATVCPGDLPVEAIWNRATEIINSYNAPVDTRPQWLKDRVAVSEKVMYGQNDGLFLRNLNDPAQAVDTRRFPRNQDFRIGGYTIVGGKKYWITVSSMGTNAPNGLLDGEVMDERYVPPTPQPTPPPVPSVPDWASSLLVDENNRPMYVIRATPLIDLEHGRPYLDKNNKEKWFQAGEKIDDISASTTVGGVTYQMTEYSFKKTKEGDWAGFGNGIASRDLSVDPAATPPGTPNNPALDDETVGLLKSIVTKLGEIIKTITDFLLRRGK
Physico‐chemical
properties
protein length:405 AA
molecular weight:44865,8 Da
isoelectric point:6,46
hydropathy:-0,51
Representative Protein Details
Accession
4K5QO
Protein name
4K5QO
Sequence length
313 AA
Molecular weight
34321,52400 Da
Isoelectric point
5,54194
Sequence
MADYSGANFIPAAAPNYQVGRAGKPILYVVIHSIVGNASSAIAAFKNPARIASSTYIVDLNGSVTQMVRESDTPYTNGNFDINQKSITIEHGDFAQPDSIRPDALYESSARLIADICKRHNIPINNGRIFGHRDVRIIFGSGTVTACPAALDVNRLIARAQQLAAPPPPPQPEWVLNLQDIGEHTNVLEKDVPLVNMTTGEVLKNFPNGSQVTVGFKTFTGGKKYYVTRYSADKRIANGFPLEDFDYKAPAPIPEPIPEPIPVPDPIEPTPPPDVPDEHPVPLPDAPDEVRWVWTQILDFLVKLWNAIFKRNG
Other Proteins in cluster: phalp2_16214
Total (incl. this protein): 38 Avg length: 327,2 Avg pI: 6,87
Protein ID Length (AA) pI
4K5QO 313 5,54194
18W3g 419 5,34744
1J3Kr 415 5,29071
1L0re 304 6,17524
1L3oL 415 5,28486
1LvVx 287 6,16177
1XsIQ 324 5,77680
1diNu 488 8,94526
1jGxz 305 5,20102
239na 318 5,27838
2RUrp 320 5,57070
36CyL 418 5,48248
36vRu 308 6,65820
3ZqdI 242 8,52918
4HrES 281 6,12977
4fWQ5 312 6,22935
4g0El 383 7,05641
4gKIF 298 6,59420
4kpLg 241 8,39980
4oj8g 287 7,65123
5TbmK 276 9,27347
5jeBY 228 5,64163
6QtHK 303 5,53898
6d6yD 314 8,79924
6f9ZT 315 8,93843
6riBG 277 9,20191
7JDPN 323 6,04025
83MyK 312 8,67230
84Vca 228 9,64062
8a5iR 304 5,99358
8d7Mi 303 6,66110
8dR1X 380 9,20952
8iPI6 303 6,17524
8iWwx 331 5,93077
8j0h3 321 6,58959
Yh0w 314 8,83296
c0Kt 517 6,18609
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_36626
25FVY
 29 28,3% 268 8.398E-73
2 phalp2_34085
8plKk
 11 28,6% 272 2.083E-58
3 phalp2_872
8dsHX
 35 32,4% 296 8.850E-47
4 phalp2_37526
3iAYu
 8 24,1% 232 3.594E-30
5 phalp2_20487
3X7ua
 81 26,4% 212 6.135E-26
6 phalp2_31553
4f5QX
 101 26,4% 272 9.377E-25
7 phalp2_10949
4Jkr6
 29 24,7% 275 2.603E-23
8 phalp2_26095
7w4x3
 24 22,1% 221 8.690E-23
9 phalp2_1799
36BX3
 4 24,8% 330 2.610E-20
10 phalp2_11379
3RDO
 2 22,4% 348 2.610E-20

Domains

Domains
Ami2
Unannotated
Representative sequence (used for alignment): 4K5QO (313 AA)
Member sequence: 1LShm (405 AA)
1 313 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4K5QO) rather than this protein.
PDB ID
4K5QO
Method AlphaFoldv2
Resolution 91.12
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50