Protein

Protein accession
PXCd [EnVhog]
Representative
174wy
Source
EnVhog (cluster: phalp2_37090)
Protein name
PXCd
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSIMPLDPQRIVFSGSEFLIYDIVDLLPRHPKFPFGSEAINPNTGKRDVRGSYQEVPGRMIKTIIYHQTAGGYGRFDKQVFKTASFFVRNPTWKKNPRYGQPKQPEWLWTGEGRGWPGFAYTWFVPFDPTTMFTDRSRSVIYQCNHLDFVTWHTGDGQNEGGGGCAFQGYFLEPGEVNHPMKGYDGHPSAIQMKIAELFWLEYAVPVLGASVLTGHWEHGKLACPGEDLREKVQELRGYA
Physico‐chemical
properties
protein length:240 AA
molecular weight:27327,7 Da
isoelectric point:7,09
hydropathy:-0,49
Representative Protein Details
Accession
174wy
Protein name
174wy
Sequence length
241 AA
Molecular weight
26911,38440 Da
Isoelectric point
9,27876
Sequence
MASVFNFEPKRVVFKGSCYAVYDVSDLLPRHPNFPHGFGGIDPNKGQPYLTVPYRINPRRNITHLVLHQTGGGYRDAWTALLEEARFFVRDPSWKENAAGQWKWTGEGRGWPGFAYTFWVPFKPIVWRDDEGVERYLIFQTQPLSMISFHTGGVLNASGVGMALQGYFLAEKDGITVPRKGTDGSPSQAQLTSVAAFVAGYAQPELKVKVLTGHWEHGKPSCPGDAAKALVIKLRDDLRMK
Other Proteins in cluster: phalp2_37090
Total (incl. this protein): 2 Avg length: 240,5 Avg pI: 8,18
Protein ID Length (AA) pI
174wy 241 9,27876
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_15957
4RjQQ
 2 28,8% 253 1.097E-25
2 phalp2_30557
5Dl0o
 4 29,5% 240 1.767E-24
3 phalp2_37743
4iRxM
 2 32,3% 170 1.086E-12
4 phalp2_32766
2bd5J
 17 27,9% 229 1.295E-10
5 phalp2_3166
8m30x
 2 20,7% 198 1.551E-07
6 phalp2_39380
4H4oF
 116 22,7% 215 6.887E-06

Domains

Domains
Unannotated
Representative sequence (used for alignment): 174wy (241 AA)
Member sequence: PXCd (240 AA)
1 241 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
PXCd
Method AlphaFoldv2
Resolution 91.72
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (174wy) rather than this protein.
PDB ID
174wy
Method AlphaFoldv2
Resolution 94.21
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50