Protein

Protein accession
PP87 [EnVhog]
Representative
1Rjmh
Source
EnVhog (cluster: phalp2_10402)
Protein name
PP87
Lysin probability
98%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MDTFDAVQFVWWQGVVEDRKDPLQLGRCRVRILGYHPQDREAVKVEQLPWAFPLQDITSAAISGIGHAPVGPVEGTWVIGFFRDGENAQEPIMMGTIGGIPQELPCLRGLGFFDPNGVYPLPGTSPVQDAIKAASTAGGLGIADLATAFGVDPSLVLQAQDIASGVQGQVETAQSISSGVQSQIETAVSDAVSAAAGVTATPAQIEAAAKNIISNAQGQIDSAAAGILSGVQGQVAAVEDIVAGAQADIEAAALGVITDAGALSSGIKDKISGAVSGVLSKLAVVGKGIELAAGPIIDALKSAQDKALDLASSTVSSVLDGLPGDNAVENLNAIVDGTIEFNGLSFSTPGIGEPDTSRLARTDGQVIFGRSSQEHPVVSQKTSTLKIPGFRGVPIESEASNPNAPLDKDLRQITTANSFVKWFEPPTEAVFTEYPFNHVYESESGHIQEFDDTPGHERIHTFHKSGTFEEIHPDGSKMTKVVGKNYEIVLQDNNLLVKGDLNITVDDQARIKVQNTFDIEVADGTMQVVVRKGNLNIQVEKGDANVFVAGNLTTTVTGDKRDVVGGLYVLDVKGAIIINAGSQITIRGATIFLN
Physico‐chemical
properties
protein length:594 AA
molecular weight:62188,1 Da
isoelectric point:4,59
hydropathy:0,00
Representative Protein Details
Accession
1Rjmh
Protein name
1Rjmh
Sequence length
673 AA
Molecular weight
69113,01140 Da
Isoelectric point
4,69629
Sequence
MPEFMGTNGFVWWQGVVEDRHDPLQLGRCRVRILGWHPQARASVSISDLPWAFPLSPITSAAMNGIGHAPVGPVEGTWVMGFFRDGENAQEPVMLGTLGGIPEQEPCLRGLGFFDPNGKYPLPGSNPVQDAIDKATSIESKITGALPQAAAVGVLLGADPKILDQALDIASGIQGQVEIVSSVASGVEVQVSTAVEKAIGTIPGIDISPDQIQSLTKNIVADSQKQITAAADGILSGLGLPEVAAIEGIVSGVKENIEAAALAAITSAQGLEGLAGGITGNVKGAVKGAIGDALTKLNITGKGIEQEGADLITAAKEVQAKAVAAASKSVSNILDGLFDSIPGGIPGGIPGGIPEDVAAAVAETAAAAGEAAASAAAAAGASVADAAAAGAAAVSAATAAAAGGGNLVNSLSGIASGAISFQGLKFSTPGLREPDTSRLARTDGTVILGKTSEEHPVVSQKTNVLKIPGFPGVPIESEASNPNAPLDKDLRQIATANSFVTWFEPPTCAPFTEYPFNHVYESESGHIQEFDDTPGFERIHTFHKAGTFDEIHPDGSRMTKIVGTNYEIILKDDNLLVKGDLNITVDDQARILIQNTFDIEVTDGTMQVVVRKGNLNVQVEKGNANVFVAGNLTTQVGGNRTDKIAGSYTIEVGGNYRLQAGQVTIRAGTIFLN
Other Proteins in cluster: phalp2_10402
Total (incl. this protein): 8 Avg length: 618,0 Avg pI: 4,55
Protein ID Length (AA) pI
1Rjmh 673 4,69629
1RiMM 672 4,44432
1RjMF 594 4,56863
1RjgE 599 4,63109
1RjuJ 607 4,51042
2qPGx 598 4,50917
Rxqn 607 4,47888
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2981
17Voe
 233 30,4% 686 4.172E-69
2 phalp2_27319
4oMsm
 77 29,7% 670 2.485E-62
3 phalp2_1801
38aME
 321 28,0% 770 4.623E-58
4 phalp2_5453
2YDfB
 126 27,4% 685 1.087E-53
5 phalp2_38299
8LuOl
 3 28,7% 671 1.622E-51
6 phalp2_7668
6zcUH
 22 28,7% 641 3.300E-48
7 phalp2_9412
8Imd3
 595 27,1% 703 5.917E-48
8 phalp2_25176
1S9RO
 30 25,5% 755 2.090E-42
9 phalp2_16137
4kSAg
 28 24,4% 683 4.966E-42
10 phalp2_24771
6NLWX
 5 25,3% 587 1.551E-38

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1Rjmh) rather than this protein.
PDB ID
1Rjmh
Method AlphaFoldv2
Resolution 63.69
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50