Protein

Protein accession
LoM4 [EnVhog]
Representative
6VCZH
Source
EnVhog (cluster: phalp2_26026)
Protein name
LoM4
Lysin probability
97%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MLLGTNMSIWNDFQKFLGVGQPQQTPTQQAPVEPSKPDYYERLKIAESGGRAEVKAKTSSATGHHQFIEGTWKELTSKYSKPYSLEDRKDPAKSLEIAKLYTEENKKILSKALGDEPTDTQLYAAHFLGTTGAKKFLMASPKKLAKDVVNAKQVAANKNIFFDEKNKPRTVSQVYGVLQKKIGEE
Physico‐chemical
properties
protein length:185 AA
molecular weight:20667,3 Da
isoelectric point:9,36
hydropathy:-0,73
Representative Protein Details
Accession
6VCZH
Protein name
6VCZH
Sequence length
199 AA
Molecular weight
21781,67850 Da
Isoelectric point
9,33117
Sequence
VDIAAEFEKFKGTVGNAVTSIADEFEAFRSGGKQQPAAPLVQPAVEAPKKPDYIERLKYAESGGDVAAKAKTSSAVGHHQFVKKTWGELSTKYNLGYGLEDRLDPEKSRKVAELYTDENRKILTKALKAEPTDTQLYAAHFLGPTGAKKLLLAPPMAPAIKHVDAAQVKANKNIFYDKQTGKPRKVIEVYALLQKKIGE
Other Proteins in cluster: phalp2_26026
Total (incl. this protein): 19 Avg length: 192,6 Avg pI: 9,02
Protein ID Length (AA) pI
6VCZH 199 9,33117
1JYy7 186 9,15536
1KJ4r 210 9,20339
20xyA 183 9,23614
2WLdf 186 9,30074
4Nypy 180 9,12519
52Ej9 173 9,06292
5T8vT 230 9,18521
5ywlF 183 9,22164
6ItFM 183 9,23595
6Iviv 183 9,20713
6xl4E 185 9,28372
7Gg5Z 217 8,51049
8DhuB 202 9,34613
8kbYm 204 5,53250
8mSrr 195 9,14034
AWyT 197 9,55558
A0A6J5NQL0 179 9,33671
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_30617
6ygl2
 27 57,2% 187 3.024E-69
2 phalp2_1723
2pp6N
 16 35,2% 142 2.994E-29
3 phalp2_20892
6T4HE
 1 34,6% 176 1.132E-26
4 phalp2_18821
1lm7s
 3 38,5% 148 3.501E-25
5 phalp2_29643
8s2FN
 29 34,7% 141 3.501E-25
6 phalp2_18445
6yzr7
 2 37,9% 129 1.472E-23
7 phalp2_36017
5Ezqj
 3 31,5% 152 2.911E-21
8 phalp2_27120
2PQih
 3 29,0% 155 1.008E-20
9 phalp2_34168
2ygzI
 3 30,8% 146 1.644E-19
10 phalp2_31010
1oDTV
 130 34,0% 138 4.953E-18

Domains

Domains
Unannotated
Representative sequence (used for alignment): 6VCZH (199 AA)
Member sequence: LoM4 (185 AA)
1 199 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6VCZH) rather than this protein.
PDB ID
6VCZH
Method AlphaFoldv2
Resolution 84.93
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50