Protein

Protein accession
1LDCg [EnVhog]
Representative
4Pxsw
Source
EnVhog (cluster: phalp2_28767)
Protein name
1LDCg
Lysin probability
98%
PhaLP type
endolysin
Probability: 96% (predicted by ML model)
Protein sequence
MLKSRKLISIVIWITSILLFSNYVYHNENIVNSLRTELHITKGKLDKKHDDLVSIKKQTEFRDYLEYRIISTCHLKNPKGLSKLSDEIFFTIIDEIEKYDIPYSIFFRLIDHESGFEFIENTQGTGAFGYCQVLPSTFDIFSKMLNIKNIHNEVNNIKVGAYVLKYAFDIYCNRGLNEKESWYMALIMYSGGSKGLAKTEMLYYNKDLRGLIANK
Physico‐chemical
properties
protein length:215 AA
molecular weight:25101,8 Da
isoelectric point:8,56
hydropathy:-0,19
Representative Protein Details
Accession
4Pxsw
Protein name
4Pxsw
Sequence length
238 AA
Molecular weight
28285,63390 Da
Isoelectric point
9,65893
Sequence
MKNIKRFIERIYFTYIFNTKSKKKYIIIPMLLISISSSWLYGYKFRDNKITDLNLTINDLTFNNDSIHYVNDSLLFDLIELDSLKQDGDYYRYLAFKHGKILIPEKINKDDIMLIHKMSKKYSIPLKYIYRLIWQESKYNPNAKSHMGANGYMQVMPKTFTAIKKRYVTKNGNIDHLDKNKQNILIGTFYIDYLYKKYKRWDLTFAAYNAGPGNVQLAGNNIPNISETIHYVKFIMKN
Other Proteins in cluster: phalp2_28767
Total (incl. this protein): 14 Avg length: 246,6 Avg pI: 8,85
Protein ID Length (AA) pI
4Pxsw 238 9,65893
1MRbn 236 9,72088
1gmw4 241 9,69761
1poj6 219 8,57760
2nBTC 236 6,92091
3aJRj 246 8,65096
3xOEB 216 9,07446
48avv 290 9,48280
4ALLB 236 6,44181
4HaZ7 256 9,38971
4gJUM 291 9,67917
7SAD 235 9,66634
XcNf 298 8,40160
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2946
XAmR
 22 33,5% 152 3.919E-41
2 phalp2_28534
40dtQ
 23 30,3% 178 2.622E-19
3 phalp2_16709
JFfU
 2 22,4% 156 5.370E-16

Domains

Domains
SLT
Representative sequence (used for alignment): 4Pxsw (238 AA)
Member sequence: 1LDCg (215 AA)
1 238 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4Pxsw) rather than this protein.
PDB ID
4Pxsw
Method AlphaFoldv2
Resolution 87.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50