Protein

Protein accession
JMi [EnVhog]
Representative
1n2Uq
Source
EnVhog (cluster: phalp2_20025)
Protein name
JMi
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MGKNYVSKVISVATKEVGYLEKASNSQLDSKTANAGYGNWTKYANYFDTKHPDFYNGRKNGFDWCDMFVDWCFVNAYGYEEGRKLLCQPLHSTGAGCSYSAQFYKNKGQFHYRGETPKVGDQIFFGSDPYHTGLVYKVDSTFVYTIEGNTSSDAGVVANGGCVAKKKYYRTYEGIHGYGRPKYDTEPKKVVSVKFKNNGAIYKVDWKDLVGGASKSIKSIKKGEKVEFIKDVKYGWSKVKSGKTTGYTMNPNLDKSGLSKFPTKTLTKDKKVILVENKKAGKTVTIKKGTKITVICEILKGKYAGYSYFKIGKDSKRYYGKI
Physico‐chemical
properties
protein length:322 AA
molecular weight:36129,8 Da
isoelectric point:9,60
hydropathy:-0,66
Representative Protein Details
Accession
1n2Uq
Protein name
1n2Uq
Sequence length
325 AA
Molecular weight
36023,25650 Da
Isoelectric point
8,92605
Sequence
MTVSEAIRKLLSVAENEVGYLEKATNAQLDDKTANAGRNNYTKYARDHAKWGTYNASKQGYAWCDMFVDWCFITAFGFSAGMEMTCQPKGLYGAGCTMSYNYFRDAGQSVPVSKVQEGDQIFFGSPGNMTHTGIVYKVDSAKIYTIEGNTGSGENTVIPNGGGVFKKWYYRNSAAIGGIGRPKWDVVSKISGIPERTELKSVRYGSFQGGIFAEVPFSCIERMEHIRMDGARGEYLTSAAVRAKWNGRAPDIVINAELFNYSNYTPASGVVHHGEMEYRGWQPFIGFSNYRTPIQERTGKTLTGLRITATSTVRHCIPARMYCAN
Other Proteins in cluster: phalp2_20025
Total (incl. this protein): 6 Avg length: 305,3 Avg pI: 8,61
Protein ID Length (AA) pI
1n2Uq 325 8,92605
3TKug 328 9,37759
3VElf 314 9,26702
45rNZ 264 9,31815
45xWq 279 5,19960
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_14320
3VFlX
 143 38,1% 199 1.848E-44
2 phalp2_3807
69Der
 57 42,0% 200 4.075E-43
3 phalp2_32084
62aVI
 2 35,1% 216 3.637E-40
4 phalp2_34753
3g9I4
 5 37,3% 225 3.719E-34
5 phalp2_11549
ZJ7o
 17 26,7% 243 5.026E-18

Domains

Domains
CHAP
Unannotated
Unannotated
Disordered region
Representative sequence (used for alignment): 1n2Uq (325 AA)
Member sequence: JMi (322 AA)
1 325 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
JMi
Method AlphaFoldv2
Resolution 92.47
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1n2Uq) rather than this protein.
PDB ID
1n2Uq
Method AlphaFoldv2
Resolution 75.48
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50