Protein

Protein accession
Io38 [EnVhog]
Representative
6GyMB
Source
EnVhog (cluster: phalp2_29030)
Protein name
Io38
Lysin probability
94%
PhaLP type
endolysin
Probability: 91% (predicted by ML model)
Protein sequence
MNALQYNTRKLLPPEAMIRFASQYIGLQEIVGDKHNPIIVQMFKDIGFEWIKDDETSWCSCFINWVAFQVGCSMSNALDARSWLNIGERIFNPKPGDVVIFWRESLGQ
Physico‐chemical
properties
protein length:108 AA
molecular weight:12486,2 Da
isoelectric point:5,26
hydropathy:-0,10
Representative Protein Details
Accession
6GyMB
Protein name
6GyMB
Sequence length
102 AA
Molecular weight
11187,48380 Da
Isoelectric point
7,78502
Sequence
MTINVYETAKEYEGIAEFPGAKRHNPEITKMFAATGNSWVTDDETPWCAAFVGAVLAQCGIQGTGKLNARSYLDWGQKVELKNARRGDIVILSRGNSKTQGH
Other Proteins in cluster: phalp2_29030
Total (incl. this protein): 34 Avg length: 128,1 Avg pI: 7,67
Protein ID Length (AA) pI
6GyMB 102 7,78502
1esrW 103 8,81923
1p1k9 101 6,05622
2UPUE 103 5,38779
33ZHB 143 9,17496
3VfVl 123 5,12883
3tLJI 82 4,83776
4F3fg 89 6,07759
4QFKU 101 4,93558
4ZRl4 143 9,39080
4l4HM 143 9,41195
4piJp 176 9,47584
4xL7i 119 6,49786
57Fdv 176 9,47584
59dj1 143 9,30029
5DFMC 188 9,35167
5nUSm 143 9,19263
5ugN1 176 9,41588
5wQ9L 143 9,39055
6HKjG 176 9,31673
6NPu5 104 5,08302
6Vn6b 104 6,82622
6xh9o 143 9,39080
7Itk8 105 5,09695
7nF7c 150 9,25162
8FTHp 102 4,88334
8blg 150 9,47932
8oxph 144 8,92908
8rWK 95 6,06196
98AU 89 9,17580
jQ8F 143 9,17496
xy66 104 7,71722
zMLo 140 5,90252
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_19771
7LzfF
 669 51,5% 99 1.420E-44
2 phalp2_38334
tIE9
 1 44,3% 97 6.018E-28
3 phalp2_20416
3dJBJ
 17 34,0% 91 6.180E-21
4 phalp2_8732
8njr6
 7 32,6% 101 6.544E-18
5 phalp2_15494
81h66
 1 38,8% 72 2.457E-14
6 phalp2_34973
4FMbb
 48 31,8% 91 5.818E-13
7 phalp2_25108
1ovVl
 1 35,8% 81 4.880E-11
8 phalp2_5598
4cukV
 91 23,0% 91 1.646E-06
9 phalp2_23906
1KSIX
 44 27,3% 95 7.962E-06
10 phalp2_22199
6U37e
 6 25,4% 106 5.269E-05

Domains

Domains
Unannotated
Representative sequence (used for alignment): 6GyMB (102 AA)
Member sequence: Io38 (108 AA)
1 102 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
Io38
Method AlphaFoldv2
Resolution 86.47
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6GyMB) rather than this protein.
PDB ID
6GyMB
Method AlphaFoldv2
Resolution 90.97
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50