Protein

Protein accession
2GkpD [EnVhog]
Representative
2GkpD (this protein)
Source
EnVhog (cluster: phalp2_4420)
Protein name
2GkpD
Lysin probability
98%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MIDELTNLIAKHEGKMLTMYTDTVGVPTIGYGHNLQEPISEAAALQILSDDVAVAVNELDDRMDWWRDLPHPAQLVLASMV
Physico‐chemical
properties
protein length:81 AA
molecular weight:8989,2 Da
isoelectric point:4,29
hydropathy:0,03
Other Proteins in cluster: phalp2_4420
Total (incl. this protein): 4 Avg length: 89,5 Avg pI: 4,52
Protein ID Length (AA) pI
2f4Gt 97 4,78575
6B8Xr 103 4,40971
8Esft 77 4,60404
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10898
4A8EL
 88 43,0% 72 5.224E-11
2 phalp2_34971
4Fusc
 2 34,3% 67 7.277E-07
3 phalp2_37746
4jFtM
 29 29,1% 79 4.910E-06
4 phalp2_32125
6B6mf
 35 39,6% 53 1.626E-04

Domains

Domains
GH24
Protein sequence: 2GkpD
1 81
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2GkpD
Method AlphaFoldv2
Resolution 96.04
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50