Protein

Protein accession
DPmD [EnVhog]
Representative
5Hxem
Source
EnVhog (cluster: phalp2_16375)
Protein name
DPmD
Lysin probability
99%
PhaLP type
endolysin
Probability: 86% (predicted by ML model)
Protein sequence
VSKAALSGKALKVAVALGALGITSKSAIGAIISTSAKESGLDPFKPEDGAKKWGVSLETRGVDYLYLKFPQLAPGGRVAKELNMPNGVSADYIRQVMAKGDEAWFTLVYPGGADAYKYRGRGLIQITGKGVYKAVGDIIGIDLVKDPDAITRDFDTAAKATGAYLMNSIGRGDSKKGLAALNGLTDEKEALKVVIANVARGGAGADKEKIDKMFDPSTNLGKTTASQLKAASEYSQLGSDAASGKKIDESSKENADLKEKLNKDKSTQTTNNTTTTNNQTNNVKPEQRVDDRPPHVRKQQQ
Physico‐chemical
properties
protein length:301 AA
molecular weight:31908,7 Da
isoelectric point:9,36
hydropathy:-0,52
Representative Protein Details
Accession
5Hxem
Protein name
5Hxem
Sequence length
299 AA
Molecular weight
31773,41530 Da
Isoelectric point
9,13164
Sequence
VALALGALGITSKAAIGAIISTSAKESGLDPFKPEDGAKSWLNTLNGKPKVVNGKTLSPLEYIYTKFPQLGPGGRVAKELNMPNGVPEEYIRQTMAKGDEAWFTLVYPGGADAYKYRGRGLIQITGKGVYKAVGDIIGIDLVKDPDAITRDFDTAAKATGAYLMNSIGRGDSKKGLAALNGLTDDKEALKVVIANVARGGAGADKEKIDKMFDPSTNLGKTTASQLEAASKYTQLGSDAASGNKVDESSKENADLKEKLNKDKSAQTTNNTTTTNNQTNNVKPEQKVDDRPPHVRKQQQ
Other Proteins in cluster: phalp2_16375
Total (incl. this protein): 2 Avg length: 300,0 Avg pI: 9,24
Protein ID Length (AA) pI
5Hxem 299 9,13164
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_16987
7Z5vG
 38 32,1% 205 1.049E-13
2 phalp2_28613
8vKQz
 46 30,7% 231 1.179E-09
3 phalp2_29533
27K5Z
 4 29,6% 256 1.574E-09
4 phalp2_32969
46TFv
 2 30,2% 195 3.740E-09

Domains

Domains
Unannotated
Disordered region
Representative sequence (used for alignment): 5Hxem (299 AA)
Member sequence: DPmD (301 AA)
1 299 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5Hxem) rather than this protein.
PDB ID
5Hxem
Method AlphaFoldv2
Resolution 84.34
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50