Protein

Protein accession
1KgnR [EnVhog]
Representative
88rqB
Source
EnVhog (cluster: phalp2_12734)
Protein name
1KgnR
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
ALTPEVVGPMYKKKYWDAVKADEMPDGLDYLMFDFAVNAGPGRAIKTMQKAIGTTPDGAIGPKTMQALKDANQSELVAKFSAEKEAFYRSLPTFGTFGKGWLRRVAEAKTHAETMLA
Physico‐chemical
properties
protein length:117 AA
molecular weight:12804,6 Da
isoelectric point:8,85
hydropathy:-0,32
Representative Protein Details
Accession
88rqB
Protein name
88rqB
Sequence length
88 AA
Molecular weight
10027,25080 Da
Isoelectric point
9,13087
Sequence
MTLQRCIGVKDDGIFGPGTMKAVKEAAPEEIIGKFFDVRIRFYQQLKNYETFGKGWHHRAATVSLDSKRMHEKHQAKDSKDSESSPSQ
Other Proteins in cluster: phalp2_12734
Total (incl. this protein): 30 Avg length: 94,6 Avg pI: 8,04
Protein ID Length (AA) pI
88rqB 88 9,13087
18Am7 80 9,89772
1Kj6J 161 9,02836
1oZa9 103 9,62076
1pW4H 73 8,16004
1wmYG 62 6,07810
1yjMq 101 4,98810
2apt8 104 5,27519
3RaKc 104 4,70129
45Suj 125 8,82864
464Cw 83 9,52283
47DIi 84 10,00390
48Rt4 96 5,70012
48h6i 70 9,45585
498DM 112 8,87151
4BPFj 107 5,70956
4YKyf 91 8,68352
4ab2h 65 9,59813
4bcj2 124 8,84031
4dx6J 98 6,77057
58qEX 94 6,27630
593UG 65 9,10540
5E4yZ 119 6,26158
5eYzt 86 9,10482
5mhV1 86 9,98971
81s9j 90 8,75985
Jacm 79 7,76895
TjrI 83 9,45379
e97j 87 6,90846
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_22059
5CcNX
 221 45,5% 68 1.927E-26
2 phalp2_4413
2E5KU
 28 37,7% 53 3.819E-19
3 phalp2_39877
1ayoe
 23 36,7% 68 1.062E-15
4 phalp2_4278
84OYZ
 16 35,0% 60 1.571E-12
5 phalp2_21563
2cRdU
 12 42,8% 63 5.159E-11
6 phalp2_4684
4Ht8d
 20 33,3% 69 1.695E-09
7 phalp2_16981
84YNU
 1 32,2% 62 1.050E-07
8 phalp2_37756
4ljFe
 3 30,0% 70 1.050E-07
9 phalp2_10551
8uXHW
 1 29,3% 58 3.739E-07

Domains

Domains
PG_3
Representative sequence (used for alignment): 88rqB (88 AA)
Member sequence: 1KgnR (117 AA)
1 88 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF09374

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (88rqB) rather than this protein.
PDB ID
88rqB
Method AlphaFoldv2
Resolution 90.33
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50