Protein

Protein accession
8yf3t [EnVhog]
Representative
1yBnb
Source
EnVhog (cluster: phalp2_4106)
Protein name
8yf3t
Lysin probability
99%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
mgmfdqwsqkeatpsttvdpkqadftyieeglglpegvlyslmmaesdgnpyavspmgalgpfqllpstaakhganpydahqaalaagselqwqlgehegdldkalasynyghgnferrgfdlqktedfqkkhsrdgrsettehrnrfyrtyipsrqqavkpdnippafnfppdpkqiahkperafrssllk
Physico‐chemical
properties
protein length:192 AA
molecular weight:21499,6 Da
isoelectric point:5,97
hydropathy:-0,84
Representative Protein Details
Accession
1yBnb
Protein name
1yBnb
Sequence length
181 AA
Molecular weight
19726,90820 Da
Isoelectric point
6,15910
Sequence
MNFSEVEAKHRLPKGMLSTIAGIETGGHPDPDRAVSPKGAIGRFQLMPATAKELGVDPTDPQQNMEGGARYLRWLLDNTDNDVEKAVTAYNYGIGNVWKAEKNAKAVGGNWKDFVKAEESRNYLAKYNSSLGVGEAETQQAVLPKSIEMGQPQEVASAPQPQQVARKPSGGYIKSYLESYI
Other Proteins in cluster: phalp2_4106
Total (incl. this protein): 4 Avg length: 208,5 Avg pI: 6,82
Protein ID Length (AA) pI
1yBnb 181 6,15910
3MYb3 269 9,48087
8CAWF 192 5,67784
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_6299
6TEAE
 47 44,1% 120 1.619E-21
2 phalp2_546
D4nQ
 40 40,7% 157 3.908E-18
3 phalp2_32795
2xoLt
 8 39,6% 131 1.192E-16
4 phalp2_23440
6BLF7
 1 37,6% 125 2.731E-13
5 phalp2_17520
5z96M
 10 32,8% 149 4.369E-12
6 phalp2_16329
5n5Gj
 32 35,5% 166 8.082E-12
7 phalp2_25246
42eCz
 1 32,0% 125 1.494E-11
8 phalp2_37875
4T4us
 3 34,9% 123 2.762E-11
9 phalp2_26445
1QCmS
 16 35,2% 122 3.754E-11
10 phalp2_21840
4nlmw
 65 32,8% 149 9.204E-09

Domains

Domains
SLT
Disordered region
Representative sequence (used for alignment): 1yBnb (181 AA)
Member sequence: 8yf3t (192 AA)
1 181 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8yf3t
Method AlphaFoldv2
Resolution 72.78
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1yBnb) rather than this protein.
PDB ID
1yBnb
Method AlphaFoldv2
Resolution 81.99
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50