Protein

Protein accession
2Cydi [EnVhog]
Representative
2Cydi (this protein)
Source
EnVhog (cluster: phalp2_9899)
Protein name
2Cydi
Lysin probability
92%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MKTLSFICATLGLLCSLNDAPDVKSTQDLVERCVIQENSLLPEHERFPIDFVVSVSALETGWWTSRFFQIGINAFGVKNIDVSEPHIKSLESPSVMVKAYHTLCESVYDFMLLLNTDKNYVEFREVRLKQWIVNEVNIYDLFDTMYNYAEDPLYIEKLYRTAKKVSPETR
Physico‐chemical
properties
protein length:170 AA
molecular weight:19731,4 Da
isoelectric point:4,98
hydropathy:-0,10
Other Proteins in cluster: phalp2_9899
Total (incl. this protein): 49 Avg length: 163,8 Avg pI: 7,50
Protein ID Length (AA) pI
115Ae 142 9,32401
1Etv0 159 8,95061
1GDAI 159 8,95061
1RDaO 193 5,95885
1Sqgy 123 9,23137
1T5Dm 183 6,64751
1VWBH 160 5,38239
1Vxvx 130 7,80772
1fnOx 126 9,62457
1g60Y 177 7,81571
1s6Z0 153 9,74751
1tfpJ 136 5,24808
1u9BE 184 8,48670
1v5tx 162 4,60671
1w24Q 177 6,64945
1w8hh 186 6,43732
1wi66 183 5,18954
1xrsc 121 9,12010
1xtUh 210 5,54467
2Ilck 165 9,56074
2x58G 132 5,91634
2x8lM 141 5,41843
2yUPV 195 5,96880
3CDN8 164 6,95632
3HRrR 156 5,11718
3ID7D 164 6,95507
3INXd 161 8,52029
3OVXP 178 6,19746
3Unx2 177 6,22389
42X6o 159 8,95061
48wbr 196 8,87203
4R3lB 159 8,90632
4Uw8d 199 9,60103
5DjRu 119 9,74886
7EMay 164 9,03694
8AAvf 156 8,61344
8AbEc 157 7,74922
8BOdC 183 6,64751
8DsBV 142 8,76810
8E8Ye 157 8,50559
8bZR2 176 6,29176
8cGTG 180 8,49817
8wXHo 159 8,97498
8wYlU 159 8,90632
8wfkY 164 6,95632
8yPLL 180 8,49817
8yg4w 156 5,11718
qrED 193 6,42556
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27854
8z2UL
 887 34,0% 135 1.029E-58
2 phalp2_2807
8wEtz
 388 33,0% 139 7.735E-56
3 phalp2_34258
3dxLm
 725 41,4% 169 2.482E-54
4 phalp2_17928
YxWk
 140 29,6% 155 9.870E-39
5 phalp2_14296
3BOkB
 198 38,4% 130 4.402E-25
6 phalp2_24548
7J4ML
 47 24,8% 133 8.968E-15
7 phalp2_5346
2cQBB
 648 23,0% 126 5.206E-11
8 phalp2_5784
7N5g9
 18 22,4% 147 9.662E-09
9 phalp2_24545
7HQNr
 274 28,5% 119 1.312E-08
10 phalp2_17811
8AJfy
 17 21,2% 160 1.312E-08

Domains

Domains
Disordered region
GLUCO
Protein sequence: 2Cydi
1 170
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2Cydi
Method AlphaFoldv2
Resolution 89.30
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50