Protein

Protein accession
8rFpd [EnVhog]
Representative
1JgAd
Source
EnVhog (cluster: phalp2_19131)
Protein name
8rFpd
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MQINKLISKYNFNKGTASRIRYLVIHYCGATGTAKGNAEYFAEKDRGASAHYFVGYDGEIWQSVEDANIAWHCGAKEYRHKECRNANSIGIELCTKTTGSASLADENWYFEDATVASAVELTKELMAKYNIPADRVLRHYDVTGKSCPAPYVFNAGKHSWEQFQAAIRGKKEDTPVKQPKPSGKDSFQVKVESAYLNIRKGPGTDHAKTGQYTGVGAFTIVETQSGKGSDTGWGKLKSGAGWISLDYAKRL
Physico‐chemical
properties
protein length:251 AA
molecular weight:27698,7 Da
isoelectric point:9,01
hydropathy:-0,60
Representative Protein Details
Accession
1JgAd
Protein name
1JgAd
Sequence length
306 AA
Molecular weight
33986,01230 Da
Isoelectric point
6,00967
Sequence
MRIGESMDIIKCFSTTNTTYKKSRQIKYIVLHYTAGTHSEKGQARAVASMFARAAVGGSADFIVDDAETVQYNGDIRNRYCWSVGGSKYTSMSTSEGGKLYNICTNSNSISIEMCSSKKDRSNTNGDAPDWYLTAAVVKNALELTKYLMDFYGVPLDRVIMHHHVTGKLCPQPWTLNESRLSGWYDFKKKLMTGGDDEMTETINIRVNGKDIEADAINKDGSTFIKLRALEAAGFKVGYDADTKLRKLDNAPNELTLFVNNEIKDVKAVLIDGRNFVALRDMAAACGYDVDYVEETRSVILSDSDA
Other Proteins in cluster: phalp2_19131
Total (incl. this protein): 45 Avg length: 266,8 Avg pI: 8,73
Protein ID Length (AA) pI
1JgAd 306 6,00967
1bGnd 320 9,39699
24Lcf 303 9,33298
38LB6 327 9,65435
3TFPW 303 9,55081
3WFyK 318 9,63843
3WIk6 236 8,16468
3Wz6E 321 8,81214
3lDkq 246 9,23311
3lJjY 233 8,84482
3rQK8 240 9,39886
3t21e 240 9,36315
3wfYz 232 8,48354
3x9J3 240 9,30061
3yC7H 232 8,69583
41e08 328 9,30029
4DBzJ 298 8,95416
4JY7J 331 9,24988
4JYzJ 327 9,15524
4JZ50 230 7,57405
4K08c 320 8,99651
4ygLF 298 8,71240
4ywOj 296 8,78190
4yxjq 294 9,06163
5LEim 235 7,64544
5Lj3f 240 9,27689
5R1vQ 243 9,41027
5Trup 234 7,64839
5VkDs 240 9,46488
68jre 235 6,64990
6dQMO 234 8,48354
6eKSc 235 7,64527
6hqTo 234 7,65390
6jhKA 232 9,34297
6jzqn 233 8,49057
6oU7Z 233 8,49792
6qgcy 233 9,07465
6s4q8 234 8,18711
6vWEf 234 7,03817
7DJxh 286 9,02946
7DOos 267 9,37681
7DT8u 298 9,19243
7YXW4 233 8,68765
7q34w 322 9,31654
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1605
81mMl
 270 45,1% 186 1.155E-66
2 phalp2_38909
238Ru
 1 41,6% 204 7.551E-66
3 phalp2_7116
2lzss
 1 38,6% 202 8.494E-51
4 phalp2_40668
5i2H9
 1 32,6% 199 7.421E-45
5 phalp2_7264
3WBGP
 11 31,7% 195 3.071E-43
6 phalp2_36615
23Gpv
 52 28,8% 218 3.667E-42
7 phalp2_24299
3nIle
 36 34,5% 185 6.815E-42
8 phalp2_29527
23SbO
 38 30,1% 252 7.082E-40
9 phalp2_31053
1GV4E
 13 33,5% 194 3.324E-39
10 phalp2_9318
7vPuw
 15 26,0% 276 9.976E-28

Domains

Domains
Ami2
Cu_amine_oxidN1
Representative sequence (used for alignment): 1JgAd (306 AA)
Member sequence: 8rFpd (251 AA)
1 306 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF07833

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1JgAd) rather than this protein.
PDB ID
1JgAd
Method AlphaFoldv2
Resolution 86.45
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50