Protein

Protein accession
8madq [EnVhog]
Representative
7ecbT
Source
EnVhog (cluster: phalp2_33456)
Protein name
8madq
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNGFDSANPLTPSLAALFVSQGYSFVGRYLAPECSWKRLTPDEARSNNEAGLYIVSFFERYQDRAREGATAGAEDGETAYQLAKEVGQPEGTTIYLPADYNAGPEDFDAIEAYMRAADQQMPGYELGVYGSYSVCKAMYERGVTKKLMQTIAWSYGKRYENASIFQSEIDKPENGVNVDLDVSNGDAGGWNMLKPQQNVPQLPAAIANNIIDSYLDATWKNCEAQRLQAEKDGRTSDAQSWQALRDWQHILANQLRVSSGQPEQ
Physico‐chemical
properties
protein length:264 AA
molecular weight:29315,0 Da
isoelectric point:4,58
hydropathy:-0,62
Representative Protein Details
Accession
7ecbT
Protein name
7ecbT
Sequence length
331 AA
Molecular weight
36000,52050 Da
Isoelectric point
9,35696
Sequence
MSKGFDCATKLTTVTAKLLKAAGFDYVARYLGNSWKTFDAAEAKAIHDAGLNLISIFEKNSTYVGYFTKSQGIADAKEAEQYAKAAGQPTGTAIYFTVDYNAQSSHMGAIKDYLAGVKETIKDYKIGLYGSYSVINAMKDMVDYHWQTYAWSGGKVADFIHMHQYENGVSVSGISLDRNDIKKDPGHWGKVATVKASSTKTVVKKVSVPDSYTVKKGDTLSEIGAKYGLDYHDLKTWNGLKSDTIYPGQKLKLKKPTTKAKTNGKAIVPYPGHLIKNGSTGKDVIRIQNAVGVTADGLYGAKTEAAVKAYQKRHGLAVDGIVGPDTWNVMF
Other Proteins in cluster: phalp2_33456
Total (incl. this protein): 7 Avg length: 328,4 Avg pI: 8,14
Protein ID Length (AA) pI
7ecbT 331 9,35696
1debm 318 9,14344
1lYBR 389 9,76098
5hXV3 342 9,35638
5tE5y 386 9,94053
7gBWZ 269 4,84401
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_7566
5nMV0
 10 38,8% 314 4.259E-72
2 phalp2_8820
2pMjJ
 148 29,5% 338 1.420E-43
3 phalp2_23126
4EcjY
 7 27,9% 318 4.391E-36
4 phalp2_22506
1fTIt
 1 28,1% 338 5.787E-32
5 phalp2_4665
4E5hH
 25 25,5% 348 4.690E-29
6 phalp2_35596
1e1YU
 1 25,8% 394 1.660E-25
7 phalp2_35636
1oyV0
 2 23,1% 380 2.244E-25

Domains

Domains
Rv2525c
LysM
PG_1
Representative sequence (used for alignment): 7ecbT (331 AA)
Member sequence: 8madq (264 AA)
1 331 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF01476, PF08924

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8madq
Method AlphaFoldv2
Resolution 96.09
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7ecbT) rather than this protein.
PDB ID
7ecbT
Method AlphaFoldv2
Resolution 87.22
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50