Protein

Protein accession
8jkb3 [EnVhog]
Representative
8cPqj
Source
EnVhog (cluster: phalp2_18983)
Protein name
8jkb3
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MMLQLQKQLAWLGYQPGRLDGVWGPKTAAALKAAQNDHGFDVDAVAEINTRGRVAAVDTLVEEARVLVARIADPVWALFPYGTAALRRALDAAMLEGCVYGQRADYFLAQVAHESGGFRWMEEIADGSAYNGRRDLGNHLGPNFGIKYKGRGILQLTGYKNYQRFGELLDLDLADNPKKAADPAISARVAVAYWTDRNLNALSDRSEFKAVTRSINGGYNGYRDRLKWLQRIQAVRA
Physico‐chemical
properties
protein length:237 AA
molecular weight:26275,5 Da
isoelectric point:9,27
hydropathy:-0,31
Representative Protein Details
Accession
8cPqj
Protein name
8cPqj
Sequence length
239 AA
Molecular weight
26071,41000 Da
Isoelectric point
9,70412
Sequence
MNVIRCQHLLSRLGYQPGPLDGLLGRRTAGAIKAAERRAGLRATGKVSGVLLADLDRRLASVISGVGWLRIEDIQMVAPSFPPEHLHHLQAALYEIAATPLRSAHFIAQIAHESDRFRALEEYASGKAYEGRADLGNTEPGDGPRYKGRGVIQLTGRANYARASEWLGIDLVRQPDLAALPAVAYQTAAFYWLDRGINAKADRDDVRGVTKIINGGYNGLKDRRGLLNGAKHALYVNIT
Other Proteins in cluster: phalp2_18983
Total (incl. this protein): 14 Avg length: 241,9 Avg pI: 9,38
Protein ID Length (AA) pI
8cPqj 239 9,70412
1I3Lb 237 9,74847
1n5jD 238 9,72095
22xut 244 9,59530
2JKT8 238 9,82519
2iZ6P 238 9,78748
3Yc0z 238 9,76504
5jrFT 238 9,47983
7TCDN 238 9,88463
7x1Dq 259 9,60961
dG1b 262 5,95789
gQc9 243 9,55417
suiS 238 9,35651
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_7910
jtKX
 1 51,0% 229 3.439E-72
2 phalp2_32955
3ZpUq
 39 54,1% 170 1.246E-56
3 phalp2_1654
8rD3A
 4011 48,5% 167 2.101E-55
4 phalp2_23269
4XEAI
 9 51,6% 155 2.875E-55
5 phalp2_22262
7pbAz
 301 43,1% 204 3.182E-53
6 phalp2_16916
27hsI
 40 49,3% 166 1.372E-51
7 phalp2_22221
71It3
 12 40,0% 222 2.069E-49
8 phalp2_6233
6x5Zy
 12 47,3% 186 9.917E-49
9 phalp2_14498
4ODLg
 45 46,9% 162 4.258E-47
10 phalp2_14147
2iCT4
 4 34,8% 261 4.258E-47

Domains

Domains
PG_1
GH19
Representative sequence (used for alignment): 8cPqj (239 AA)
Member sequence: 8jkb3 (237 AA)
1 239 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00182, PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8jkb3
Method AlphaFoldv2
Resolution 89.97
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (8cPqj) rather than this protein.
PDB ID
8cPqj
Method AlphaFoldv2
Resolution 92.49
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50