Protein

Protein accession
8ipKk [EnVhog]
Representative
3VYNI
Source
EnVhog (cluster: phalp2_10798)
Protein name
8ipKk
Lysin probability
89%
PhaLP type
endolysin
Probability: 94% (predicted by ML model)
Protein sequence
MFNFKNLFKPKQEKSISDLLKPISELEKKPQPVEIDLPVQGNYQLDNKAFPKIPASSQCGYTSLAVLLSQFIPEAKSDDFIYEMIKYFEKDFLVGKSRRFGSMMQNHVFMAQFYLKKYGIDRQVIFKPHSGSVQDVIEVLQKGYAVGVAGMMTGDGHFMVISGYSELRKAFKVQDPYKLFDFDKSKYTNQSGLNVYYPVDRFLKYLEASSLMASQNTKKGIRFYYIGDKI
Physico‐chemical
properties
protein length:230 AA
molecular weight:26490,4 Da
isoelectric point:9,26
hydropathy:-0,34
Representative Protein Details
Accession
3VYNI
Protein name
3VYNI
Sequence length
199 AA
Molecular weight
22156,26030 Da
Isoelectric point
9,08651
Sequence
LKKILEIQQNDQIDNKLLGRIKPSGQCGYTAAAMLLSSVYDKAKTDEFIVELILTMDKAFIDNKSDVRNGAFLAKYPDYLNAILKKNNIPKKTKFLAHSGTNQDIINAIDKGSPVMCSTMITKDGHYICIIGYDNDRKVWIVNDPFGHYSFADSRYAIIGKNSGSKVEYPYTLLGNAMIASSRIATGGSKSGYRLLWLE
Other Proteins in cluster: phalp2_10798
Total (incl. this protein): 16 Avg length: 200,6 Avg pI: 8,72
Protein ID Length (AA) pI
3VYNI 199 9,08651
19TRv 197 9,06691
2r7N4 197 8,76159
499y7 205 8,59816
49Dwu 199 9,07446
4aCE4 199 9,13725
4eHTw 230 9,26303
6R9nR 221 4,57994
7XdF8 197 8,70338
891B5 197 8,88311
8nDZ4 199 9,08451
8nquz 197 8,71202
Gr6s 199 8,95029
J6pu 145 9,28082
KViA 199 9,07433
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_33523
7cOy
 1 22,9% 192 3.163E-17
2 phalp2_18755
ZDbB
 27 25,5% 184 3.224E-15
3 phalp2_84
4WuCJ
 39 26,4% 178 6.841E-12
4 phalp2_1376
1gp6M
 3 24,7% 186 8.849E-10
5 phalp2_16156
4uGeP
 55 26,4% 170 1.621E-09
6 phalp2_6070
4WjHW
 2 21,5% 200 7.337E-09
7 phalp2_5390
2yClh
 4 20,4% 191 2.448E-08
8 phalp2_15940
4KM2Z
 6 20,4% 176 3.307E-08
9 phalp2_31237
7YVNV
 7 23,4% 183 3.642E-07
10 phalp2_6277
6MCzG
 1588 23,1% 177 2.184E-06

Domains

Domains
PET_C39
Representative sequence (used for alignment): 3VYNI (199 AA)
Member sequence: 8ipKk (230 AA)
1 199 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13529

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8ipKk
Method AlphaFoldv2
Resolution 91.42
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3VYNI) rather than this protein.
PDB ID
3VYNI
Method AlphaFoldv2
Resolution 97.49
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50