Protein

Protein accession
8bNpD [EnVhog]
Representative
3yWQ2
Source
EnVhog (cluster: phalp2_21728)
Protein name
8bNpD
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MANWNEIKQAIASGDTVYTAVNCYPASTWFRKLEYISKQTGVPIDTIKTLNPEYFTNGIRLNTNFDHECLPLLLNKGSTPTPPTPGGSTEFNLANNICPLPAGSYTVTQEFGVYGHRGIDMSTNRVSGIPVYAVQQGTVATVQAWDGHTLTGNQSWGNMILINHGVTDGVTYTTRYAHLATVPSFSVGQVLTKGTQLSTAGTTGNSTGIHLHLEVTANGTLVNPRNYVPI
Physico‐chemical
properties
protein length:230 AA
molecular weight:24775,5 Da
isoelectric point:6,64
hydropathy:-0,19
Representative Protein Details
Accession
3yWQ2
Protein name
3yWQ2
Sequence length
237 AA
Molecular weight
25332,30120 Da
Isoelectric point
4,40317
Sequence
MASWSDIQNMLAQDVTVYVAIKPRYPGSWFEDVKNISKHSGVSTSTIIADNQDLFAGTFPQNDVDYSVIILNRGGDVPGPDPGPDPEPGDYIFDLAHNISPLPSGSYYVSQEYGEGGHGGTDMAVANGTAVGAVQQGVVVTRQDWDGHTTTGNMSWGNMLVIRHDDDTGNTFYTLYAHNSQLNVNVGDTVTQGQTIALSGNSGNVSGSGGGYHLHLEVWVGGYGTSYRADPRDYVPI
Other Proteins in cluster: phalp2_21728
Total (incl. this protein): 4 Avg length: 247,8 Avg pI: 6,16
Protein ID Length (AA) pI
3yWQ2 237 4,40317
6s9et 230 5,92407
8cx6V 294 7,68124
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8822
2sKc0
 6 36,6% 172 4.942E-14
2 phalp2_21998
4ZChj
 22 30,3% 165 6.684E-14
3 phalp2_16978
7Z7xq
 27 29,5% 166 1.652E-13
4 phalp2_6413
eUqq
 2 28,3% 155 1.632E-10

Domains

Domains
PET_M23
Representative sequence (used for alignment): 3yWQ2 (237 AA)
Member sequence: 8bNpD (230 AA)
1 237 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8bNpD
Method AlphaFoldv2
Resolution 85.70
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3yWQ2) rather than this protein.
PDB ID
3yWQ2
Method AlphaFoldv2
Resolution 73.67
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50