Protein

Protein accession
24Ldx [EnVhog]
Representative
24Ldx (this protein)
Source
EnVhog (cluster: phalp2_23963)
Protein name
24Ldx
Lysin probability
99%
PhaLP type
endolysin
Probability: 93% (predicted by ML model)
Protein sequence
MKELRGIDISEWNGGLNYTALAKNIDFAILREGCRTRKDYLFDTHINGCRAARIPIRGVYHFIYAVNDHQAKLEAESCIKNVQAAGLPKSTYIWADLEYDTITKAKAQGVNLGPAEVRKFTEIFCKTVKAAGYPTGIYTNLDYWVRMYGDEILFRYPVWYAQYSSKRSKDCLIWQCGSRVLPGSNGQALDYDIWYEKEDVVAEPVAYELNKSTEELAKEVIAGKWGNGEARKIALGSRYDEVQKAVNTLLAPKPSTNVEDYVLEPPNIEQLAQDVIAGKYGIGDARKKALGANYDAVQKRVNELMKAKTEVVTVAYSDRRLTFVAQMQRWIGLKETDGSFKIIIDTYNRGLAKAVKRWGTRNVQMLYSWAWCACTVSAAAMACGLDDIIPIEISCQYMIEIAKKFGIWQESDRYRPNPGDIIMYDWQDTGYGDNVGVADHVGVVESIEGNRFTVIEGNRNDSVSRRQMAVNVIYIRGYITPNF
Physico‐chemical
properties
protein length:483 AA
molecular weight:54592,6 Da
isoelectric point:7,44
hydropathy:-0,32
Other Proteins in cluster: phalp2_23963
Total (incl. this protein): 5 Avg length: 478,6 Avg pI: 6,37
Protein ID Length (AA) pI
21gO8 475 6,95115
24CGn 501 6,69208
3VDQ3 479 6,21593
3WzNv 455 4,55038
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2377
7JCYq
 91 39,0% 479 3.686E-122
2 phalp2_4916
6k3vw
 208 33,3% 489 2.854E-79
3 phalp2_39103
2m4j4
 107 34,0% 408 2.435E-69
4 phalp2_24407
4kkNT
 14 41,0% 319 5.404E-64
5 phalp2_10962
4Lap7
 1 29,3% 484 2.733E-54
6 phalp2_38437
1cCmC
 101 36,0% 333 5.008E-41
7 phalp2_38736
13rhz
 58 28,0% 503 1.178E-37
8 phalp2_22096
5ZSom
 2292 34,3% 326 3.319E-29
9 phalp2_4009
11iJK
 7 25,2% 511 2.610E-27
10 phalp2_14277
3nL7u
 72 23,9% 488 1.023E-12

Domains

Domains
GH25
CW_7
CW_7
CHAP
Protein sequence: 24Ldx
1 483
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF05257, PF08230

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
24Ldx
Method AlphaFoldv2
Resolution 86.82
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50