Protein

Protein accession
87o1c [EnVhog]
Representative
6wSxJ
Source
EnVhog (cluster: phalp2_9153)
Protein name
87o1c
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MLKGIDISRWQGTINWPVVSKNVEFAMIKIGGSDDGFYMDGMAQRNVIEARSAGMKIGFYVYLGGAHAVGEEVQHIKNLISQIGGLKPGEIFALDWEERTADEVGYVAGIAKGCIDAGFPPPLIYMSLSRVTGNNWQRLVAMNCGLWVAAWGNNDSIPDATPGSDEWPFWAMWQYSSTGSVPGIAGRVDLDQFNGTAEQFKQYGQKTGVSIPQPIPIPQPVQPEGTTSDYTVQPGDNLSAIGSKYGVSWQQIWALNRDRVSDPNKIFPGQVLKVPGTPPVVAPANPPLPTATHKTHTVVNGENLSVIAARYGLASWHQLYDANKNTIGGNPDLIRPGQVLVIP
Physico‐chemical
properties
protein length:343 AA
molecular weight:37139,7 Da
isoelectric point:5,56
hydropathy:-0,20
Representative Protein Details
Accession
6wSxJ
Protein name
6wSxJ
Sequence length
345 AA
Molecular weight
38109,53790 Da
Isoelectric point
5,89792
Sequence
MRVIDVSRHQQFINWPFVAANIQAAMIKIGGSDDGLYTDSKAVTNAIGARSAGMAVGFYYFLGGVHTIAEEVQQIKNSINEIGGLRPGEPFALDWEKRRAGHDEVGYLTAIVEALIRGGMPSPFIYMNLNYVRTQNWINLVNRGCPLWVAAWGDNDDIPETQEIPSSDEWKQWDMWQYTSISNVPGIAGRVDQNEFRGDVERFKTFGGRSGLSVPESVNVATPIPPQNNITEYTVIAGDTLSGIAPRYGVSWQQLYALNRDRISNPNKIYVGQKLRTPGASMAPATQPQHPAPAPHEHIVQNGENLSVIAAKYGLPSWQTLYDLNAAIIGNDPNLIKPGQRLRLP
Other Proteins in cluster: phalp2_9153
Total (incl. this protein): 7 Avg length: 339,6 Avg pI: 6,22
Protein ID Length (AA) pI
6wSxJ 345 5,89792
18We3 327 6,42857
1lpwy 346 8,91174
4foPg 344 5,71098
7YkkP 327 5,81999
A0A6J5N9Y7 345 5,23762
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_30061
2NCcc
 23 31,7% 233 3.657E-49
2 phalp2_9283
7cTgF
 101 34,5% 356 1.719E-48
3 phalp2_17042
7nSW4
 41 32,0% 356 3.902E-45
4 phalp2_37809
4Ez2v
 8 29,5% 227 2.486E-44
5 phalp2_39009
8i5mw
 7 26,6% 229 3.988E-43
6 phalp2_22096
5ZSom
 2292 26,3% 383 1.862E-42
7 phalp2_32821
2L8bh
 41 26,0% 242 1.387E-38
8 phalp2_4299
7ZuoI
 1 29,6% 233 4.733E-38
9 phalp2_39912
1jXPT
 300 31,8% 220 1.101E-31
10 phalp2_26548
858CP
 728 26,4% 355 2.741E-31

Domains

Domains
GH25
LysM
LysM
Representative sequence (used for alignment): 6wSxJ (345 AA)
Member sequence: 87o1c (343 AA)
1 345 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF01476

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
87o1c
Method AlphaFoldv2
Resolution 83.61
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6wSxJ) rather than this protein.
PDB ID
6wSxJ
Method AlphaFoldv2
Resolution 80.39
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50