Protein

Protein accession
1GVN8 [EnVhog]
Representative
5v3gC
Source
EnVhog (cluster: phalp2_12097)
Protein name
1GVN8
Lysin probability
99%
PhaLP type
endolysin
Probability: 70% (predicted by ML model)
Protein sequence
MHIYRSKVNRKDAEKNWPIVAKSMVKAGMTSKRQVVGFLSNVMAECNMRNIKEQGGPFRYDPFRGRGFIQLTNDDGYRAAGKHFKLDLVANPDLILQNTELSADIACWYWCGGMGNADIRPYAERGDWANCRSIINAGHPGRIGSTTQPGTREILEFCEKADAYFKSGLDPNAVGAAAMPSNYGLGCVDTGGAATRTLNGTGATAPLDALSYALGIHALDNQRSHILRCELDVSSQPDILKLDAQMTFEGKGFGEDLDGSYTVDEVTFYFGRTLEADLVAYKPDPNAPKPQIFGVGDAGQIAAGQQAQAAGTTPAAGSAPAAGDINQRILKAALAAEFKDTSAGPEGGNQACAWAVNLFAIEPAGLKKVGSNWVYCPSMIEAFQKGRGKKVSRAEAQPGDIWFAPNEAHVGVCLTSGCSEVLSNSSSKAKFKWRGSLDSMNRYYGGGTEFLYRVLN
Physico‐chemical
properties
protein length:456 AA
molecular weight:48941,6 Da
isoelectric point:6,98
hydropathy:-0,32
Representative Protein Details
Accession
5v3gC
Protein name
5v3gC
Sequence length
487 AA
Molecular weight
52742,97100 Da
Isoelectric point
5,09933
Sequence
MVDNPIKPTNTTTTPTPNQATDGKKAEDKQQSSGLNVVQQVAEVFPEFKDNIVKYFPYIAKEAAQNQMTSVNHLIAICATLVAECGFFPKKEEGVIDNVTYGPGEIAGRGFIQLTWTSAFEIARDQFKVDCVNNPDLLLEPTLSAKVFCWYWCASPKPSASTYDMRPYAEKGDWNNVRSIVNAGHPDLIHEATPSPQFFEAIERGKAGFKFGIDPSAIPLPGTYGASDFDTGGAAHKTMIQQNPTSQLSALEYALGLYAAEAHKSIRADLVLDLAGQPDILNLDAQTTFKMKGLGQDLDDTYTVESVLFIFGYTAEAHVKAYKPDPKMGTPQILKGDANKPDVSQGTNQRPDLTGLNQKIYDAAIAAKGRSSAEGPRGMNVACAWAVNLFVIQVIGLPMLGGEAGMASVVSCVQDMEGGRAQKVPRDQAIAGDIWVGFDMAHIGIMMDKTTVLSNSSSKASFTWEDNIDSVNGFYGGSEHGIYRLNK
Other Proteins in cluster: phalp2_12097
Total (incl. this protein): 5 Avg length: 497,0 Avg pI: 6,05
Protein ID Length (AA) pI
5v3gC 487 5,09933
4Vqvq 531 4,97457
4wutX 488 5,09280
8i4DR 523 8,08603
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2254
4uG2q
 3 35,5% 346 2.083E-85
2 phalp2_9459
zQYk
 2 31,9% 382 1.711E-70
3 phalp2_38309
j9Eu
 1 30,0% 359 3.795E-61

Domains

Domains
Disordered region
Unannotated
Unannotated
Unannotated
Representative sequence (used for alignment): 5v3gC (487 AA)
Member sequence: 1GVN8 (456 AA)
1 487 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1GVN8
Method AlphaFoldv2
Resolution 74.07
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5v3gC) rather than this protein.
PDB ID
5v3gC
Method AlphaFoldv2
Resolution 72.72
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50