Protein

Protein accession
82sqd [EnVhog]
Representative
1Xf2W
Source
EnVhog (cluster: phalp2_28466)
Protein name
82sqd
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKIFLSPSNQTSNIGLYSRYDMNECLACEQIAAATKTHLLDYDVEVIVYAQEMTMNERINNTNDLCSPTDLHLCIHTNASSNAAAKGTETMYNSNNIKSKELAKLLLNNISEVFGTKRRAYAYDSLSELKNVNCIPCYVECGFHTNIEDINVIVNYYDEVATAIAASLVEFFALQYKQPEPDPTPKPTTSVLQIGAYTVENNAINLSTQLLKAGFSVYWLNENNMIKVCVSYTDIEETTAALKQRGFNVWIK
Physico‐chemical
properties
protein length:252 AA
molecular weight:28262,7 Da
isoelectric point:4,96
hydropathy:-0,19
Representative Protein Details
Accession
1Xf2W
Protein name
1Xf2W
Sequence length
272 AA
Molecular weight
29993,58970 Da
Isoelectric point
9,11636
Sequence
MSRIYLAPSCQTWNVGLYSLYGTNEAKMCNLITDYIVKELSKYDVTVYSGEIYTGLAGNERRANELGCTSYYAIHTNAGGSTAHGVTALYQSWSGFTWARRTKSKLMATELCKGIESLGRYNRGAYAGKKQSDGREWFGDLRVPNMPSTILEIEFHTNPDATSWIVSNPHIIGVNIAQSIARIEGLKLKAQPYTGTLPTAPIGRNSSGQYGTYTNKVRWQKFLCWYGEDVAVDGSYGLDTKAKTITFQKENGLVPDGNAGYKTIGVAKIVTK
Other Proteins in cluster: phalp2_28466
Total (incl. this protein): 2 Avg length: 262,0 Avg pI: 7,04
Protein ID Length (AA) pI
1Xf2W 272 9,11636
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_263
6tFdA
 76 28,5% 280 1.819E-21
2 phalp2_13391
4kek3
 12 31,0% 219 6.137E-21
3 phalp2_15834
4hTzG
 686 28,3% 187 7.835E-19
4 phalp2_36176
6WzQU
 47 29,8% 201 1.434E-18
5 phalp2_17555
5USO4
 4 32,5% 206 1.434E-18
6 phalp2_27984
103o3
 18 29,1% 182 1.011E-12
7 phalp2_3831
6vxOH
 1 24,3% 263 1.937E-11
8 phalp2_30465
4Uk3l
 3 26,9% 278 2.600E-11
9 phalp2_24413
4m1OU
 1246 24,7% 194 1.175E-09
10 phalp2_1754
2GVcd
 17 28,0% 200 6.756E-09

Domains

Domains
Ami3
PG_1
Representative sequence (used for alignment): 1Xf2W (272 AA)
Member sequence: 82sqd (252 AA)
1 272 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF01520

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
82sqd
Method AlphaFoldv2
Resolution 93.83
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1Xf2W) rather than this protein.
PDB ID
1Xf2W
Method AlphaFoldv2
Resolution 90.99
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50