Protein

Protein accession
1D2cq [EnVhog]
Representative
3j8r5
Source
EnVhog (cluster: phalp2_31437)
Protein name
1D2cq
Lysin probability
98%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MTRQDQERLKVIDRLLREDVVDKIVPSPHRSEGWGKGRPDRPTPWGVMVHFTGGPHGTAAKWFQDPRAKASAHVVIQRDGIVVLCVPVFDRAWHAGDSVWKGERYCNRFTFGIELENWGPIVRRGDGYFVWPPVDPKTKVRQYRRRFRGTGIHHAPFRPDFEFWESYDPRQIDALVEVLKILVAPPGDWTPLDVGNVVGHEQVAPGRKIDPGPAFPWKEVVARVFEIDPYLDTDADPDEDEDDEHFFQILDGTSKDRGDGVA
Physico‐chemical
properties
protein length:262 AA
molecular weight:29950,3 Da
isoelectric point:5,73
hydropathy:-0,61
Representative Protein Details
Accession
3j8r5
Protein name
3j8r5
Sequence length
262 AA
Molecular weight
29896,17150 Da
Isoelectric point
5,73451
Sequence
MTRQDQERLKVIDRLLREDVVDKIVPSPHRSEGWGKGRPDRPTPWGVVVHFTGGPHGTAAKWFQDPRAKASAHVVIQRDGTVVLCVPVFDRAWHAGDSVWKGERYCNRFTFGIELENWGPIVRRGDGYFVWPPVDPKTKVRQYRRRFRGTGIHHAPFRSDFEFWESYDPRQIDALVEVLKILVAPPGDWTPLDVGNVVGHEQVAPGRKIDPGPAFPWKEVVARVFEIDPYLDTDADPDEDEDDEHFFQILDGTSKDRGDGVA
Other Proteins in cluster: phalp2_31437
Total (incl. this protein): 5 Avg length: 246,2 Avg pI: 6,55
Protein ID Length (AA) pI
3j8r5 262 5,73451
1D8qi 248 6,06537
Qx8P 247 5,91952
Y3mc 212 9,27773
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_31152
3LHkO
 133 41,1% 209 1.253E-48
2 phalp2_22919
33qi6
 180 38,3% 201 1.408E-41
3 phalp2_11760
45aqa
 242 33,5% 200 1.861E-31
4 phalp2_9775
84cP5
 1 35,0% 200 2.536E-31
5 phalp2_24979
ze0C
 8 35,0% 174 1.445E-27
6 phalp2_10215
PQuN
 6 31,3% 233 1.462E-25
7 phalp2_2899
AiYm
 11 30,6% 209 6.790E-25
8 phalp2_21916
4KsAl
 20 28,8% 218 1.458E-23
9 phalp2_4783
4YJpR
 19 27,2% 253 1.943E-21
10 phalp2_38722
YdMl
 4 35,1% 185 1.211E-20

Domains

Domains
Ami2
Disordered region
Representative sequence (used for alignment): 3j8r5 (262 AA)
Member sequence: 1D2cq (262 AA)
1 262 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1D2cq
Method AlphaFoldv2
Resolution 85.31
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3j8r5) rather than this protein.
PDB ID
3j8r5
Method AlphaFoldv2
Resolution 83.79
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50