Protein

Protein accession
1APUm [EnVhog]
Representative
5h8Zd
Source
EnVhog (cluster: phalp2_23299)
Protein name
1APUm
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MGLPIKDGKITTHYKKLGKMWSKGYHTGVDFAVPTGTEVVAVADGKIEPANW
Physico‐chemical
properties
protein length:52 AA
molecular weight:5644,5 Da
isoelectric point:9,10
hydropathy:-0,29
Representative Protein Details
Accession
5h8Zd
Protein name
5h8Zd
Sequence length
58 AA
Molecular weight
6095,93290 Da
Isoelectric point
9,37520
Sequence
MGSPIKGGKVTTPYKKLGKMWSKGYHTGVDYACKVGTDIVAVADGKIENATWGASYGT
Other Proteins in cluster: phalp2_23299
Total (incl. this protein): 12 Avg length: 58,8 Avg pI: 9,32
Protein ID Length (AA) pI
5h8Zd 58 9,37520
1ik34 72 9,63256
1zjgB 55 9,63166
3043z 41 9,78129
373GB 53 9,58189
45SL3 59 7,80727
4bAt9 42 10,00029
5CetD 80 9,77839
5c63T 64 9,74499
5f4Vd 68 9,45463
S1tJ 62 7,92344
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_5056
1tK9W
 1 73,6% 38 6.043E-19
2 phalp2_6956
2YyW2
 1 32,2% 59 3.122E-10
3 phalp2_14389
4s95T
 1 31,2% 48 9.213E-07
4 phalp2_32582
1JRhw
 2 35,4% 62 1.748E-06
5 phalp2_29748
1xSNS
 1 32,2% 59 2.407E-06
6 phalp2_13328
3V3UW
 2 43,5% 39 3.316E-06
7 phalp2_18938
3u5QF
 1 32,0% 50 3.125E-05

Domains

Domains
Unannotated
Representative sequence (used for alignment): 5h8Zd (58 AA)
Member sequence: 1APUm (52 AA)
1 58 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5h8Zd) rather than this protein.
PDB ID
5h8Zd
Method AlphaFoldv2
Resolution 89.49
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50