Protein

Protein accession
1zRgD [EnVhog]
Representative
1zRgD (this protein)
Source
EnVhog (cluster: phalp2_10351)
Protein name
1zRgD
Lysin probability
99%
PhaLP type
endolysin
Probability: 96% (predicted by ML model)
Protein sequence
MSLLTLGSNMMSNKALLFCTFLCALMILLLFNMRDNAQALTLHEDVRIIISKPPAPKPDVKHIVKVEYLTYKSSTRDWRNESYLNDHYYIQPIEIQEQINCLALNIYHEAAVETNKGKLAVAFVTLNRMYSDRFPNSICGVVYDAKYSSWWKENHDKEVPLLNRCQFSWFCDGKPDEVRSEKAFETITRIATYAVLNYNYVEDPTYGAMWYHAYYVKPSWRYDFTKTATIGAHIFYRTKTNNEENESTNFGRKPEPIVFLAYR
Physico‐chemical
properties
protein length:263 AA
molecular weight:30819,9 Da
isoelectric point:7,60
hydropathy:-0,36
Cluster Membership

This protein is the only member recorded for this cluster.

Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_9879
2oYX8
 442 44,0% 175 7.580E-32
2 phalp2_27849
8yD71
 6 36,0% 197 4.226E-30
3 phalp2_21419
85EIE
 1722 43,1% 176 1.092E-27
4 phalp2_37567
3Q8a9
 8 38,0% 171 1.104E-25
5 phalp2_8528
1rrcd
 232 38,2% 178 3.189E-22
6 phalp2_38459
1hKAi
 1 35,8% 198 5.874E-22
7 phalp2_9955
30Vri
 104 35,5% 166 1.240E-20
8 phalp2_12064
5eok8
 21 36,2% 171 3.089E-20
9 phalp2_32502
1hod3
 9 27,3% 172 3.572E-07
10 phalp2_27147
30ADU
 1 24,4% 184 6.298E-04

Domains

Domains
Disordered region 1
Hydro_2
Disordered region 2
Protein sequence: 1zRgD
1 263
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07486

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1zRgD
Method AlphaFoldv2
Resolution 73.02
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50